RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 POLD1P28340 1107 aa25.33■■□□□ 1.64
SDHA-220ENST00000617470 CASP7P55210 303 aa25.33■■□□□ 1.64
SDHA-220ENST00000617470 PRR5LQ6MZQ0 368 aa25.33■■□□□ 1.64
SDHA-220ENST00000617470 SUCLG2Q96I99 432 aa25.33■■□□□ 1.64
SDHA-220ENST00000617470 ST5P78524 1137 aa25.32■■□□□ 1.64
SDHA-220ENST00000617470 OTUD7AQ8TE49 926 aaPredicted RBP25.31■■□□□ 1.64
SDHA-220ENST00000617470 APBB1O00213 710 aa25.31■■□□□ 1.64
SDHA-220ENST00000617470 HDAC5Q9UQL6 1122 aa25.31■■□□□ 1.64
SDHA-220ENST00000617470 CDHR2Q9BYE9 1310 aa25.3■■□□□ 1.64
SDHA-220ENST00000617470 SSH3Q8TE77 659 aa25.3■■□□□ 1.64
SDHA-220ENST00000617470 EXOC6BQ9Y2D4 811 aa25.3■■□□□ 1.64
SDHA-220ENST00000617470 ABCC12Q96J65 1359 aa25.29■■□□□ 1.64
SDHA-220ENST00000617470 HSP90B1P14625 803 aaKnown RBP25.28■■□□□ 1.64
SDHA-220ENST00000617470 POLA2Q14181 598 aa25.28■■□□□ 1.64
SDHA-220ENST00000617470 BICC1Q9H694 974 aaKnown RBP25.28■■□□□ 1.64
SDHA-220ENST00000617470 NOP58Q9Y2X3 529 aaKnown RBP25.28■■□□□ 1.64
SDHA-220ENST00000617470 EPHA10Q5JZY3 1008 aa25.27■■□□□ 1.64
SDHA-220ENST00000617470 PDE8AO60658 829 aa25.27■■□□□ 1.64
SDHA-220ENST00000617470 GSPT1P15170 499 aaKnown RBP25.27■■□□□ 1.64
SDHA-220ENST00000617470 KAZALD1Q96I82 304 aa25.27■■□□□ 1.64
SDHA-220ENST00000617470 CCDC85AQ96PX6 553 aaPredicted RBP25.27■■□□□ 1.64
SDHA-220ENST00000617470 SPON1Q9HCB6 807 aa25.27■■□□□ 1.64
SDHA-220ENST00000617470 CHMP3Q9Y3E7 222 aa25.27■■□□□ 1.64
SDHA-220ENST00000617470 SLC10A5Q5PT55 438 aa25.25■■□□□ 1.63
SDHA-220ENST00000617470 NLRP3Q96P20 1036 aa25.25■■□□□ 1.63
SDHA-220ENST00000617470 ZBTB47Q9UFB7 747 aaPredicted RBP25.25■■□□□ 1.63
SDHA-220ENST00000617470 FOXO4P98177 505 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 LMBR1LQ6UX01 489 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 PLA2G12BQ9BX93 195 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 BCL11AQ9H165 835 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 CTSWP56202 376 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 C3orf67Q6ZVT6 689 aa25.24■■□□□ 1.63
SDHA-220ENST00000617470 PTGER2P43116 358 aa25.23■■□□□ 1.63
SDHA-220ENST00000617470 TTC22Q5TAA0 569 aa25.23■■□□□ 1.63
SDHA-220ENST00000617470 TBC1D32Q96NH3 1257 aa25.23■■□□□ 1.63
SDHA-220ENST00000617470 NRXN2Q9P2S2 1712 aa25.23■■□□□ 1.63
SDHA-220ENST00000617470 MTX1Q13505 466 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 DDRGK1Q96HY6 314 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 SGIP1Q9BQI5 828 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 PPP1R1BQ9UD71 204 aaPredicted RBP25.22■■□□□ 1.63
SDHA-220ENST00000617470 SALL3Q9BXA9 1300 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
SDHA-220ENST00000617470 SRGAP3O43295 1099 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 BRIP1Q9BX63 1249 aa25.22■■□□□ 1.63
SDHA-220ENST00000617470 TTLL11Q8NHH1 800 aa25.21■■□□□ 1.63
SDHA-220ENST00000617470 LRRCC1Q9C099 1032 aa25.21■■□□□ 1.63
SDHA-220ENST00000617470 CCDC152Q4G0S7 254 aa25.2■■□□□ 1.62
SDHA-220ENST00000617470 PDE6BP35913 854 aa25.19■■□□□ 1.62
SDHA-220ENST00000617470 LAMB2P55268 1798 aa25.18■■□□□ 1.62
SDHA-220ENST00000617470 TNRC6CQ9HCJ0 1690 aaKnown RBP25.18■■□□□ 1.62
SDHA-220ENST00000617470 RABL6Q3YEC7 729 aaPredicted RBP25.18■■□□□ 1.62
SDHA-220ENST00000617470 OSBPL3Q9H4L5 887 aa25.18■■□□□ 1.62
SDHA-220ENST00000617470 GREM2Q9H772 168 aa25.18■■□□□ 1.62
SDHA-220ENST00000617470 CSF1RP07333 972 aa25.18■■□□□ 1.62
SDHA-220ENST00000617470 MFAP1P55081 439 aaKnown RBP25.18■■□□□ 1.62
SDHA-220ENST00000617470 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
SDHA-220ENST00000617470 UPF2Q9HAU5 1272 aaKnown RBP25.18■■□□□ 1.62
SDHA-220ENST00000617470 RIC1Q4ADV7 1423 aa25.17■■□□□ 1.62
SDHA-220ENST00000617470 SURF6O75683 361 aaKnown RBP25.16■■□□□ 1.62
SDHA-220ENST00000617470 PDE1AP54750 535 aa25.16■■□□□ 1.62
SDHA-220ENST00000617470 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
SDHA-220ENST00000617470 CCDC57Q2TAC2 916 aa25.16■■□□□ 1.62
SDHA-220ENST00000617470 RPGRQ92834 1020 aaKnown RBP25.16■■□□□ 1.62
SDHA-220ENST00000617470 MYH3P11055 1940 aa25.16■■□□□ 1.62
SDHA-220ENST00000617470 C10orf71Q711Q0 1435 aa25.16■■□□□ 1.62
SDHA-220ENST00000617470 ITGA6P23229 1130 aa25.15■■□□□ 1.62
SDHA-220ENST00000617470 IFIT5Q13325 482 aaKnown RBP25.15■■□□□ 1.62
SDHA-220ENST00000617470 ANKRD31Q8N7Z5 1873 aa25.15■■□□□ 1.62
SDHA-220ENST00000617470 RAB11FIP3O75154 756 aa25.14■■□□□ 1.62
SDHA-220ENST00000617470 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
SDHA-220ENST00000617470 SEC31BQ9NQW1 1179 aa25.14■■□□□ 1.62
SDHA-220ENST00000617470 TAF7LQ5H9L4 462 aa25.14■■□□□ 1.61
SDHA-220ENST00000617470 DDX46Q7L014 1031 aaKnown RBP25.14■■□□□ 1.61
SDHA-220ENST00000617470 ANKRD18BA2A2Z9 1011 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 H0YIN7 160 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 KLRG2A4D1S0 409 aaPredicted RBP25.13■■□□□ 1.61
SDHA-220ENST00000617470 CDC45O75419 566 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 SDSP20132 328 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 CHRNA5P30532 468 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 KLHDC4Q8TBB5 520 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 RHPN1Q8TCX5 695 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 C22orf23Q9BZE7 217 aa25.13■■□□□ 1.61
SDHA-220ENST00000617470 RBM17Q96I25 401 aaKnown RBP25.12■■□□□ 1.61
SDHA-220ENST00000617470 ZNF594Q96JF6 807 aaPredicted RBP25.12■■□□□ 1.61
SDHA-220ENST00000617470 IL1RAPL2Q9NP60 686 aa25.12■■□□□ 1.61
SDHA-220ENST00000617470 SLC4A3P48751 1232 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 TSHZ3Q63HK5 1081 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
SDHA-220ENST00000617470 STAP2Q9UGK3 403 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 SRGNP10124 158 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 MX1P20591 662 aa25.11■■□□□ 1.61
SDHA-220ENST00000617470 PA2G4Q9UQ80 394 aaKnown RBP25.11■■□□□ 1.61
SDHA-220ENST00000617470 SIL1Q9H173 461 aa25.1■■□□□ 1.61
SDHA-220ENST00000617470 A0A0G2JLW4 131 aa25.09■■□□□ 1.61
SDHA-220ENST00000617470 NPR1P16066 1061 aa25.09■■□□□ 1.61
SDHA-220ENST00000617470 KIF1BPQ96EK5 621 aa25.09■■□□□ 1.61
SDHA-220ENST00000617470 CDC5LQ99459 802 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms