RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	PPM1E	Q8WY54	764 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	EXOC4	Q96A65	974 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	CLIP2	Q9UDT6	1046 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	ANXA1	P04083	346 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	ACTN2	P35609	894 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	L2HGDH	Q9H9P8	463 aa		13.57	□□□□□ -0.24
TP53-222	ENST00000617185	USP27X	A6NNY8	438 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	KCNQ3	O43525	872 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	SDS	P20132	328 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	OAS2	P29728	719 aa	Known RBP	13.56	□□□□□ -0.24
TP53-222	ENST00000617185	ARHGAP29	Q52LW3	1261 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	HSP90AB3P	Q58FF7	597 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	LUZP1	Q86V48	1076 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	LRRC8A	Q8IWT6	810 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	SUFU	Q9UMX1	484 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	ATP6V1D	Q9Y5K8	247 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	RGPD1	P0DJD0	1748 aa		13.56	□□□□□ -0.24
TP53-222	ENST00000617185	CDC25B	P30305	580 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	TDO2	P48775	406 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	MCTP2	Q6DN12	878 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	MPRIP	Q6WCQ1	1025 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	CNKSR2	Q8WXI2	1034 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	RTL1	A6NKG5	1358 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	KDR	P35968	1356 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	FMN2	Q9NZ56	1722 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	REXO1L1P	Q8IX06	675 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	CABLES1	Q8TDN4	633 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	AXIN2	Q9Y2T1	843 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	ANKAR	Q7Z5J8	1434 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	GC	P02774	474 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	ZSCAN22	P10073	491 aa	Predicted RBP	13.55	□□□□□ -0.24
TP53-222	ENST00000617185	ATP6V1A	P38606	617 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	LEKR1	Q6ZMV7	388 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	CEP89	Q96ST8	783 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	MRVI1	Q9Y6F6	885 aa		13.55	□□□□□ -0.24
TP53-222	ENST00000617185	RGS12	O14924	1447 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	NPHP4	O75161	1426 aa	Predicted RBP	13.54	□□□□□ -0.24
TP53-222	ENST00000617185	FIBP	O43427	364 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	TYRO3	Q06418	890 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	E2F4	Q16254	413 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	ZCCHC17	Q9NP64	241 aa	Known RBP	13.54	□□□□□ -0.24
TP53-222	ENST00000617185	KCND1	Q9NSA2	647 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	SKIL	P12757	684 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	CAST	P20810	708 aa	Known RBP	13.54	□□□□□ -0.24
TP53-222	ENST00000617185	MCC	P23508	829 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	LMAN1	P49257	510 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	SMC1A	Q14683	1233 aa	Known RBP	13.54	□□□□□ -0.24
TP53-222	ENST00000617185	MAP3K11	Q16584	847 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	CCDC144B	Q3MJ40	725 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	CCDC144CP	Q8IYA2	1237 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	PHAX	Q9H814	394 aa	Known RBP	13.54	□□□□□ -0.24
TP53-222	ENST00000617185	CBX8	Q9HC52	389 aa		13.54	□□□□□ -0.24
TP53-222	ENST00000617185	TSHZ3	Q63HK5	1081 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	NOL8	Q76FK4	1167 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	CCAR2	Q8N163	923 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	IP6K1	Q92551	441 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	EIF3CL	B5ME19	914 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	MAP2K2	P36507	400 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	ANKRD20A12P	Q8NF67	263 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	TDRD7	Q8NHU6	1098 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	EIF3C	Q99613	913 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	STK31	Q9BXU1	1019 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	ADAM21	Q9UKJ8	722 aa		13.53	□□□□□ -0.24
TP53-222	ENST00000617185	CHD2	O14647	1828 aa	Known RBP	13.53	□□□□□ -0.24
TP53-222	ENST00000617185	ANAPC15	P60006	121 aa		13.52	□□□□□ -0.24
TP53-222	ENST00000617185	CCDC93	Q567U6	631 aa		13.52	□□□□□ -0.24
TP53-222	ENST00000617185	MMS22L	Q6ZRQ5	1243 aa		13.52	□□□□□ -0.24
TP53-222	ENST00000617185	UBXN4	Q92575	508 aa		13.52	□□□□□ -0.24
TP53-222	ENST00000617185	MARF1	Q9Y4F3	1742 aa	Known RBP	13.52	□□□□□ -0.25
TP53-222	ENST00000617185	NBPF20	Q3BBV1	942 aa		13.52	□□□□□ -0.25
TP53-222	ENST00000617185	CEP85	Q6P2H3	762 aa		13.52	□□□□□ -0.25
TP53-222	ENST00000617185	KRT28	Q7Z3Y7	464 aa		13.52	□□□□□ -0.25
TP53-222	ENST00000617185	DCTPP1	Q9H773	170 aa		13.52	□□□□□ -0.25
TP53-222	ENST00000617185	TRMT1	Q9NXH9	659 aa	Known RBP	13.52	□□□□□ -0.25
TP53-222	ENST00000617185	ORC3	Q9UBD5	711 aa	Predicted RBP	13.52	□□□□□ -0.25
TP53-222	ENST00000617185	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	5e-7	■■□□□ 14.2
TP53-222	ENST00000617185	MAP3K5	Q99683	1374 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	ADGRL3	Q9HAR2	1447 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	TPM1	P09493	284 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	FLII	Q13045	1269 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC196	A0A1B0GTZ2	297 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	ANO6	Q4KMQ2	910 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.51	□□□□□ -0.25
TP53-222	ENST00000617185	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
TP53-222	ENST00000617185	NUP62CL	Q9H1M0	184 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	NWD1	Q149M9	1564 aa		13.51	□□□□□ -0.25
TP53-222	ENST00000617185	PRAMEF22	A3QJZ6	481 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	CP	P00450	1065 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	F13A1	P00488	732 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	TUBB4A	P04350	444 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	SNW1	Q13573	536 aa	Known RBP	13.5	□□□□□ -0.25
TP53-222	ENST00000617185	TAF7	Q15545	349 aa	Predicted RBP	13.5	□□□□□ -0.25
TP53-222	ENST00000617185	RPAIN	Q86UA6	219 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	RAI14	Q9P0K7	980 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	KIAA0232	Q92628	1395 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	STX6	O43752	255 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	CORO7	P57737	925 aa		13.5	□□□□□ -0.25
TP53-222	ENST00000617185	RPS6KA5	O75582	802 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	TBC1D8	O95759	1140 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	CHRNA2	Q15822	529 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms