RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 RHPN1Q8TCX5 695 aa19.63■□□□□ 0.73
DDB2-212ENST00000617022 TFCP2L1Q9NZI6 479 aa19.63■□□□□ 0.73
DDB2-212ENST00000617022 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
DDB2-212ENST00000617022 HMGB2P26583 209 aaKnown RBP19.63■□□□□ 0.73
DDB2-212ENST00000617022 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
DDB2-212ENST00000617022 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
DDB2-212ENST00000617022 KIF1BPQ96EK5 621 aa19.62■□□□□ 0.73
DDB2-212ENST00000617022 COPRSQ9NQ92 184 aa19.62■□□□□ 0.73
DDB2-212ENST00000617022 PDE8AO60658 829 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 G3BP1Q13283 466 aaKnown RBP eCLIP19.61■□□□□ 0.73
DDB2-212ENST00000617022 FAM161AQ3B820 660 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 CAMKK2Q96RR4 588 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 SETDB2Q96T68 719 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 CSF1RP07333 972 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 CTSWP56202 376 aa19.61■□□□□ 0.73
DDB2-212ENST00000617022 PLEKHM2Q8IWE5 1019 aa19.6■□□□□ 0.73
DDB2-212ENST00000617022 TTLL11Q8NHH1 800 aa19.6■□□□□ 0.73
DDB2-212ENST00000617022 ZNF594Q96JF6 807 aaPredicted RBP19.6■□□□□ 0.73
DDB2-212ENST00000617022 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
DDB2-212ENST00000617022 SASH1O94885 1247 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 GYS1P13807 737 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 CCDC57Q2TAC2 916 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 ERFEQ4G0M1 354 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 GREM2Q9H772 168 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 MYH3P11055 1940 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 DEFB132Q7Z7B7 95 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 ERC1Q8IUD2 1116 aa19.59■□□□□ 0.73
DDB2-212ENST00000617022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.59■□□□□ 0.73
DDB2-212ENST00000617022 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.73
DDB2-212ENST00000617022 DDX60Q8IY21 1712 aaKnown RBP19.58■□□□□ 0.73
DDB2-212ENST00000617022 TUBGCP6Q96RT7 1819 aa19.58■□□□□ 0.73
DDB2-212ENST00000617022 NFIXQ14938 502 aa19.58■□□□□ 0.72
DDB2-212ENST00000617022 GTF2E1P29083 439 aaPredicted RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 C8orf34Q49A92 452 aa19.57■□□□□ 0.72
DDB2-212ENST00000617022 NBPF5PQ86XG9 351 aaPredicted RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 ITGA6P23229 1130 aa19.57■□□□□ 0.72
DDB2-212ENST00000617022 BAG6P46379 1132 aa19.57■□□□□ 0.72
DDB2-212ENST00000617022 IFIT5Q13325 482 aaKnown RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 COL23A1Q86Y22 540 aaPredicted RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 RRAGDQ9NQL2 400 aaPredicted RBP19.57■□□□□ 0.72
DDB2-212ENST00000617022 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
DDB2-212ENST00000617022 LAMB2P55268 1798 aa19.56■□□□□ 0.72
DDB2-212ENST00000617022 ABCC12Q96J65 1359 aa19.56■□□□□ 0.72
DDB2-212ENST00000617022 TSHZ3Q63HK5 1081 aa19.56■□□□□ 0.72
DDB2-212ENST00000617022 CCDC24Q8N4L8 307 aa19.56■□□□□ 0.72
DDB2-212ENST00000617022 CARMIL3Q8ND23 1372 aa19.55■□□□□ 0.72
DDB2-212ENST00000617022 SALL3Q9BXA9 1300 aa19.55■□□□□ 0.72
DDB2-212ENST00000617022 LRRC24Q50LG9 513 aa19.55■□□□□ 0.72
DDB2-212ENST00000617022 TAF7LQ5H9L4 462 aa19.55■□□□□ 0.72
DDB2-212ENST00000617022 CLASRPQ8N2M8 674 aaKnown RBP19.55■□□□□ 0.72
DDB2-212ENST00000617022 PUS3Q9BZE2 481 aaKnown RBP19.55■□□□□ 0.72
DDB2-212ENST00000617022 ATG9AQ7Z3C6 839 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 PNPLA7Q6ZV29 1317 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 ANKRD18BA2A2Z9 1011 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 HSP90B1P14625 803 aaKnown RBP19.54■□□□□ 0.72
DDB2-212ENST00000617022 MX1P20591 662 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 PDE1AP54750 535 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 TFCP2Q12800 502 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 TPTE2Q6XPS3 522 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
DDB2-212ENST00000617022 EYA2O00167 538 aa19.53■□□□□ 0.72
DDB2-212ENST00000617022 NPHP1O15259 732 aa19.53■□□□□ 0.72
DDB2-212ENST00000617022 GSPT1P15170 499 aaKnown RBP19.53■□□□□ 0.72
DDB2-212ENST00000617022 SLC15A2Q16348 729 aa19.52■□□□□ 0.72
DDB2-212ENST00000617022 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
DDB2-212ENST00000617022 AACSQ86V21 672 aa19.52■□□□□ 0.72
DDB2-212ENST00000617022 FLAD1Q8NFF5 587 aa19.52■□□□□ 0.72
DDB2-212ENST00000617022 EAF2Q96CJ1 260 aaPredicted RBP19.52■□□□□ 0.72
DDB2-212ENST00000617022 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
DDB2-212ENST00000617022 IL15P40933 162 aaPredicted RBP19.51■□□□□ 0.71
DDB2-212ENST00000617022 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 SLC10A5Q5PT55 438 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 RRP9O43818 475 aaKnown RBP19.51■□□□□ 0.71
DDB2-212ENST00000617022 TM4SF1P30408 202 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 STK32BQ9NY57 414 aa19.51■□□□□ 0.71
DDB2-212ENST00000617022 CIAO1O76071 339 aa19.5■□□□□ 0.71
DDB2-212ENST00000617022 IFIT2P09913 472 aaKnown RBP19.5■□□□□ 0.71
DDB2-212ENST00000617022 CNBD1Q8NA66 436 aa19.5■□□□□ 0.71
DDB2-212ENST00000617022 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
DDB2-212ENST00000617022 CCDC8Q9H0W5 538 aaPredicted RBP19.5■□□□□ 0.71
DDB2-212ENST00000617022 LDHAL6AQ6ZMR3 332 aa19.5■□□□□ 0.71
DDB2-212ENST00000617022 CASZ1Q86V15 1759 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 DDR1Q08345 913 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
DDB2-212ENST00000617022 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 SERPINB2P05120 415 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 SF3B3Q15393 1217 aaKnown RBP19.49■□□□□ 0.71
DDB2-212ENST00000617022 TNNI3KQ59H18 835 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 FPGT-TNNI3KV9GXZ4 949 aa19.49■□□□□ 0.71
DDB2-212ENST00000617022 NLRP3Q96P20 1036 aa19.48■□□□□ 0.71
DDB2-212ENST00000617022 CNNM1Q9NRU3 951 aa19.48■□□□□ 0.71
DDB2-212ENST00000617022 FBXO3Q9UK99 471 aa19.48■□□□□ 0.71
DDB2-212ENST00000617022 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
DDB2-212ENST00000617022 POLRMTO00411 1230 aaKnown RBP19.47■□□□□ 0.71
DDB2-212ENST00000617022 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
DDB2-212ENST00000617022 COL4A1P02462 1669 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms