RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
AP3S2-216ENST00000617003 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
AP3S2-216ENST00000617003 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
AP3S2-216ENST00000617003 BBOX1O75936 387 aa20.67■□□□□ 0.9
AP3S2-216ENST00000617003 GRAPQ13588 217 aa20.67■□□□□ 0.9
AP3S2-216ENST00000617003 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
AP3S2-216ENST00000617003 FER1L6Q2WGJ9 1857 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 NFKBIEO00221 500 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 YY1P25490 414 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 RASSF7Q02833 373 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 CCDC152Q4G0S7 254 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 TTLL11Q8NHH1 800 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
AP3S2-216ENST00000617003 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
AP3S2-216ENST00000617003 CTSWP56202 376 aa20.65■□□□□ 0.9
AP3S2-216ENST00000617003 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
AP3S2-216ENST00000617003 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
AP3S2-216ENST00000617003 NBPF7P0C2Y1 421 aaPredicted RBP20.63■□□□□ 0.89
AP3S2-216ENST00000617003 CCT4P50991 539 aaKnown RBP20.63■□□□□ 0.89
AP3S2-216ENST00000617003 PRELPP51888 382 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 ATF7IPQ6VMQ6 1270 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 CSF1RP07333 972 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 TRIM27P14373 513 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
AP3S2-216ENST00000617003 FOXO4P98177 505 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 CC2D2BQ6DHV5 1058 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 SP8Q8IXZ3 490 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 USP44Q9H0E7 712 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 GREM2Q9H772 168 aa20.63■□□□□ 0.89
AP3S2-216ENST00000617003 UTYO14607 1347 aa20.62■□□□□ 0.89
AP3S2-216ENST00000617003 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
AP3S2-216ENST00000617003 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
AP3S2-216ENST00000617003 COL4A1P02462 1669 aa20.62■□□□□ 0.89
AP3S2-216ENST00000617003 CLUAP1Q96AJ1 413 aa20.61■□□□□ 0.89
AP3S2-216ENST00000617003 SUCLG2Q96I99 432 aa20.61■□□□□ 0.89
AP3S2-216ENST00000617003 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
AP3S2-216ENST00000617003 TAOK3Q9H2K8 898 aa20.61■□□□□ 0.89
AP3S2-216ENST00000617003 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
AP3S2-216ENST00000617003 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
AP3S2-216ENST00000617003 LMNB1P20700 586 aa20.59■□□□□ 0.89
AP3S2-216ENST00000617003 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
AP3S2-216ENST00000617003 INTS3Q68E01 1043 aaKnown RBP20.59■□□□□ 0.89
AP3S2-216ENST00000617003 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
AP3S2-216ENST00000617003 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
AP3S2-216ENST00000617003 LTBP3Q9NS15 1303 aa20.59■□□□□ 0.89
AP3S2-216ENST00000617003 LMBR1LQ6UX01 489 aa20.59■□□□□ 0.89
AP3S2-216ENST00000617003 SNED1Q8TER0 1413 aa20.58■□□□□ 0.89
AP3S2-216ENST00000617003 ITGA6P23229 1130 aa20.58■□□□□ 0.88
AP3S2-216ENST00000617003 FAM161AQ3B820 660 aa20.58■□□□□ 0.88
AP3S2-216ENST00000617003 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.88
AP3S2-216ENST00000617003 ANKRD18AQ8IVF6 992 aa20.58■□□□□ 0.88
AP3S2-216ENST00000617003 RTL9Q8NET4 1388 aa20.58■□□□□ 0.88
AP3S2-216ENST00000617003 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
AP3S2-216ENST00000617003 PSMD1Q99460 953 aa20.57■□□□□ 0.88
AP3S2-216ENST00000617003 ZNF277Q9NRM2 450 aaPredicted RBP20.57■□□□□ 0.88
AP3S2-216ENST00000617003 CHMP3Q9Y3E7 222 aa20.57■□□□□ 0.88
AP3S2-216ENST00000617003 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
AP3S2-216ENST00000617003 MPNDQ8N594 471 aa20.56■□□□□ 0.88
AP3S2-216ENST00000617003 TMEM57Q8N5G2 664 aa20.55■□□□□ 0.88
AP3S2-216ENST00000617003 BICC1Q9H694 974 aaKnown RBP20.55■□□□□ 0.88
AP3S2-216ENST00000617003 ANKRD18BA2A2Z9 1011 aa20.55■□□□□ 0.88
AP3S2-216ENST00000617003 DPP8Q6V1X1 898 aaPredicted RBP20.55■□□□□ 0.88
AP3S2-216ENST00000617003 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
AP3S2-216ENST00000617003 NSFL1CQ9UNZ2 370 aaKnown RBP20.55■□□□□ 0.88
AP3S2-216ENST00000617003 SPEF2Q9C093 1822 aa20.54■□□□□ 0.88
AP3S2-216ENST00000617003 IFIT5Q13325 482 aaKnown RBP20.54■□□□□ 0.88
AP3S2-216ENST00000617003 MEIS3Q99687 375 aa20.54■□□□□ 0.88
AP3S2-216ENST00000617003 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
AP3S2-216ENST00000617003 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
AP3S2-216ENST00000617003 RLBP1P12271 317 aa20.53■□□□□ 0.88
AP3S2-216ENST00000617003 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
AP3S2-216ENST00000617003 IARSP41252 1262 aaKnown RBP20.53■□□□□ 0.88
AP3S2-216ENST00000617003 GPSM2P81274 684 aa20.53■□□□□ 0.88
AP3S2-216ENST00000617003 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
AP3S2-216ENST00000617003 ANKRD44Q8N8A2 993 aa20.53■□□□□ 0.88
AP3S2-216ENST00000617003 LRRC37AA6NMS7 1700 aa20.52■□□□□ 0.88
AP3S2-216ENST00000617003 PLIN1O60240 522 aa20.52■□□□□ 0.88
AP3S2-216ENST00000617003 CCDC57Q2TAC2 916 aa20.52■□□□□ 0.88
AP3S2-216ENST00000617003 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.88
AP3S2-216ENST00000617003 RTFDC1Q9BY42 306 aaPredicted RBP20.52■□□□□ 0.88
AP3S2-216ENST00000617003 ZNF594Q96JF6 807 aaPredicted RBP20.51■□□□□ 0.87
AP3S2-216ENST00000617003 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
AP3S2-216ENST00000617003 MINPP1Q9UNW1 487 aa20.51■□□□□ 0.87
AP3S2-216ENST00000617003 ZNF784Q8NCA9 323 aaPredicted RBP20.51■□□□□ 0.87
AP3S2-216ENST00000617003 SUPT20HQ8NEM7 779 aa20.51■□□□□ 0.87
AP3S2-216ENST00000617003 GNAI3P08754 354 aa20.5■□□□□ 0.87
AP3S2-216ENST00000617003 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
AP3S2-216ENST00000617003 ANKIB1Q9P2G1 1089 aa20.5■□□□□ 0.87
AP3S2-216ENST00000617003 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
AP3S2-216ENST00000617003 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
AP3S2-216ENST00000617003 C6orf229H3BNL8 230 aa20.49■□□□□ 0.87
AP3S2-216ENST00000617003 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
AP3S2-216ENST00000617003 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
AP3S2-216ENST00000617003 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms