RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
CBWD1-225ENST00000616944 TPTE2Q6XPS3 522 aa18.85■□□□□ 0.61
CBWD1-225ENST00000616944 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 COL4A1P02462 1669 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 MSH5O43196 834 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 HSP90B1P14625 803 aaKnown RBP18.84■□□□□ 0.61
CBWD1-225ENST00000616944 FAM161AQ3B820 660 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 SKAP1Q86WV1 359 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
CBWD1-225ENST00000616944 A0A1B0GUL6 1792 aa18.84■□□□□ 0.61
CBWD1-225ENST00000616944 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.61
CBWD1-225ENST00000616944 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.61
CBWD1-225ENST00000616944 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
CBWD1-225ENST00000616944 PRR5LQ6MZQ0 368 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 CHD1LQ86WJ1 897 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 CNBD1Q8NA66 436 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 KLHDC4Q8TBB5 520 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 PDGFDQ9GZP0 370 aaPredicted RBP18.82■□□□□ 0.6
CBWD1-225ENST00000616944 GREM2Q9H772 168 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 SERPINB2P05120 415 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 C3orf67Q6ZVT6 689 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
CBWD1-225ENST00000616944 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
CBWD1-225ENST00000616944 SF3B3Q15393 1217 aaKnown RBP18.81■□□□□ 0.6
CBWD1-225ENST00000616944 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
CBWD1-225ENST00000616944 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
CBWD1-225ENST00000616944 PDE4AP27815 886 aa18.8■□□□□ 0.6
CBWD1-225ENST00000616944 GTF2E1P29083 439 aaPredicted RBP18.8■□□□□ 0.6
CBWD1-225ENST00000616944 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
CBWD1-225ENST00000616944 MMP10P09238 476 aa18.79■□□□□ 0.6
CBWD1-225ENST00000616944 ITGA6P23229 1130 aa18.79■□□□□ 0.6
CBWD1-225ENST00000616944 IFIT5Q13325 482 aaKnown RBP18.79■□□□□ 0.6
CBWD1-225ENST00000616944 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
CBWD1-225ENST00000616944 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
CBWD1-225ENST00000616944 LRRCC1Q9C099 1032 aa18.79■□□□□ 0.6
CBWD1-225ENST00000616944 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
CBWD1-225ENST00000616944 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 MSL1Q68DK7 614 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 SLC16A10Q8TF71 515 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 SIL1Q9H173 461 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 SASH1O94885 1247 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 ATG9AQ7Z3C6 839 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 ZNF594Q96JF6 807 aaPredicted RBP18.78■□□□□ 0.6
CBWD1-225ENST00000616944 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
CBWD1-225ENST00000616944 KIF13BQ9NQT8 1826 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 ANKRD18BA2A2Z9 1011 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 APBB1O00213 710 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
CBWD1-225ENST00000616944 CIAO1O76071 339 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 NLRP3Q96P20 1036 aa18.77■□□□□ 0.6
CBWD1-225ENST00000616944 EYA2O00167 538 aa18.76■□□□□ 0.59
CBWD1-225ENST00000616944 ST5P78524 1137 aa18.76■□□□□ 0.59
CBWD1-225ENST00000616944 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
CBWD1-225ENST00000616944 SEC31BQ9NQW1 1179 aa18.76■□□□□ 0.59
CBWD1-225ENST00000616944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
CBWD1-225ENST00000616944 SALL3Q9BXA9 1300 aa18.75■□□□□ 0.59
CBWD1-225ENST00000616944 KLRG2A4D1S0 409 aaPredicted RBP18.75■□□□□ 0.59
CBWD1-225ENST00000616944 CRY2Q49AN0 593 aa18.75■□□□□ 0.59
CBWD1-225ENST00000616944 PARP3Q9Y6F1 533 aa18.75■□□□□ 0.59
CBWD1-225ENST00000616944 NPHP1O15259 732 aa18.74■□□□□ 0.59
CBWD1-225ENST00000616944 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
CBWD1-225ENST00000616944 LRRC24Q50LG9 513 aa18.74■□□□□ 0.59
CBWD1-225ENST00000616944 PUS3Q9BZE2 481 aaKnown RBP18.74■□□□□ 0.59
CBWD1-225ENST00000616944 ARAP2Q8WZ64 1704 aa18.74■□□□□ 0.59
CBWD1-225ENST00000616944 DLEC1Q9Y238 1755 aa18.74■□□□□ 0.59
CBWD1-225ENST00000616944 RGS3P49796 1198 aa18.74■□□□□ 0.59
CBWD1-225ENST00000616944 IL15P40933 162 aaPredicted RBP18.73■□□□□ 0.59
CBWD1-225ENST00000616944 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
CBWD1-225ENST00000616944 RIPOR2Q9Y4F9 1068 aa18.73■□□□□ 0.59
CBWD1-225ENST00000616944 CACNA1SQ13698 1873 aa18.72■□□□□ 0.59
CBWD1-225ENST00000616944 TAF7LQ5H9L4 462 aa18.72■□□□□ 0.59
CBWD1-225ENST00000616944 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
CBWD1-225ENST00000616944 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
CBWD1-225ENST00000616944 LRRC37AA6NMS7 1700 aa18.72■□□□□ 0.59
CBWD1-225ENST00000616944 LDHAL6AQ6ZMR3 332 aa18.71■□□□□ 0.59
CBWD1-225ENST00000616944 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
CBWD1-225ENST00000616944 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
CBWD1-225ENST00000616944 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
CBWD1-225ENST00000616944 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
CBWD1-225ENST00000616944 TFCP2Q12800 502 aa18.71■□□□□ 0.58
CBWD1-225ENST00000616944 ZNF609O15014 1411 aa18.7■□□□□ 0.58
CBWD1-225ENST00000616944 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
CBWD1-225ENST00000616944 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
CBWD1-225ENST00000616944 KIAA1551Q9HCM1 1747 aa18.7■□□□□ 0.58
CBWD1-225ENST00000616944 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
CBWD1-225ENST00000616944 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
CBWD1-225ENST00000616944 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
CBWD1-225ENST00000616944 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
CBWD1-225ENST00000616944 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
CBWD1-225ENST00000616944 HOXA10P31260 410 aaPredicted RBP18.68■□□□□ 0.58
CBWD1-225ENST00000616944 IGHMBP2P38935 993 aaKnown RBP18.68■□□□□ 0.58
CBWD1-225ENST00000616944 MTFR1LQ9H019 292 aa18.68■□□□□ 0.58
CBWD1-225ENST00000616944 OSBPL3Q9H4L5 887 aa18.68■□□□□ 0.58
CBWD1-225ENST00000616944 LTBP1Q14766 1721 aa18.67■□□□□ 0.58
CBWD1-225ENST00000616944 TNNI3KQ59H18 835 aa18.67■□□□□ 0.58
CBWD1-225ENST00000616944 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms