RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
TULP4-206ENST00000616856 CCDC191Q8NCU4 936 aa14.83□□□□□ -0.04
TULP4-206ENST00000616856 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
TULP4-206ENST00000616856 GPTP24298 496 aa14.82□□□□□ -0.04
TULP4-206ENST00000616856 GIGYF2Q6Y7W6 1299 aaKnown RBP14.82□□□□□ -0.04
TULP4-206ENST00000616856 COL5A3P25940 1745 aaPredicted RBP14.82□□□□□ -0.04
TULP4-206ENST00000616856 CICQ96RK0 1608 aaPredicted RBP14.82□□□□□ -0.04
TULP4-206ENST00000616856 SGSM2O43147 1006 aa14.82□□□□□ -0.04
TULP4-206ENST00000616856 CASP7P55210 303 aa14.82□□□□□ -0.04
TULP4-206ENST00000616856 RBM6P78332 1123 aaKnown RBP14.82□□□□□ -0.04
TULP4-206ENST00000616856 ISCA1Q9BUE6 129 aa14.82□□□□□ -0.04
TULP4-206ENST00000616856 HSPA4P34932 840 aa14.81□□□□□ -0.04
TULP4-206ENST00000616856 CWC27Q6UX04 472 aaKnown RBP14.81□□□□□ -0.04
TULP4-206ENST00000616856 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
TULP4-206ENST00000616856 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
TULP4-206ENST00000616856 H7C1W4 665 aa14.81□□□□□ -0.04
TULP4-206ENST00000616856 CCNL1Q9UK58 526 aaPredicted RBP14.81□□□□□ -0.04
TULP4-206ENST00000616856 RAD50Q92878 1312 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
TULP4-206ENST00000616856 CUL4AQ13619 759 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 LSG1Q9H089 658 aaKnown RBP14.8□□□□□ -0.04
TULP4-206ENST00000616856 RREB1Q92766 1687 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 SASH1O94885 1247 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 CNTROBQ8N137 903 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 LMBRD1Q9NUN5 540 aa14.8□□□□□ -0.04
TULP4-206ENST00000616856 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
TULP4-206ENST00000616856 NUP98P52948 1817 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 HSP90AB3PQ58FF7 597 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
TULP4-206ENST00000616856 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
TULP4-206ENST00000616856 SIL1Q9H173 461 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 CHMP3Q9Y3E7 222 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 ZNF831Q5JPB2 1677 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 COL15A1P39059 1388 aa14.79□□□□□ -0.04
TULP4-206ENST00000616856 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 AACSQ86V21 672 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 FAM89AQ96GI7 184 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
TULP4-206ENST00000616856 TRIM37O94972 964 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
TULP4-206ENST00000616856 LMBR1LQ6UX01 489 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
TULP4-206ENST00000616856 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
TULP4-206ENST00000616856 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
TULP4-206ENST00000616856 ZNF445P59923 1031 aa14.77□□□□□ -0.04
TULP4-206ENST00000616856 RABL6Q3YEC7 729 aaPredicted RBP14.77□□□□□ -0.04
TULP4-206ENST00000616856 NLRP10Q86W26 655 aa14.77□□□□□ -0.04
TULP4-206ENST00000616856 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.04
TULP4-206ENST00000616856 RRAGDQ9NQL2 400 aaPredicted RBP14.77□□□□□ -0.04
TULP4-206ENST00000616856 ECHDC1Q9NTX5 307 aa14.77□□□□□ -0.04
TULP4-206ENST00000616856 ANKRD36CQ5JPF3 1778 aa14.77□□□□□ -0.04
TULP4-206ENST00000616856 CPA1P15085 419 aa14.77□□□□□ -0.05
TULP4-206ENST00000616856 FOXO4P98177 505 aa14.77□□□□□ -0.05
TULP4-206ENST00000616856 SYNE4Q8N205 404 aa14.77□□□□□ -0.05
TULP4-206ENST00000616856 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.05
TULP4-206ENST00000616856 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
TULP4-206ENST00000616856 CNTNAP4Q9C0A0 1308 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 CAMTA2O94983 1202 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 IFIT2P09913 472 aaKnown RBP14.76□□□□□ -0.05
TULP4-206ENST00000616856 PTH1RQ03431 593 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 FBXO41Q8TF61 875 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 LY75O60449 1722 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 UBN2Q6ZU65 1347 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
TULP4-206ENST00000616856 RXRBP28702 533 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
TULP4-206ENST00000616856 ZBTB38Q8NAP3 1195 aaPredicted RBP14.76□□□□□ -0.05
TULP4-206ENST00000616856 GPT2Q8TD30 523 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
TULP4-206ENST00000616856 FAM177BA6PVY3 158 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 GNPATO15228 680 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 DTNBO60941 627 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
TULP4-206ENST00000616856 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
TULP4-206ENST00000616856 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 TRIM44Q96DX7 344 aaPredicted RBP14.75□□□□□ -0.05
TULP4-206ENST00000616856 TRMT112Q9UI30 125 aaKnown RBP14.75□□□□□ -0.05
TULP4-206ENST00000616856 NSFL1CQ9UNZ2 370 aaKnown RBP14.75□□□□□ -0.05
TULP4-206ENST00000616856 BRD1O95696 1058 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
TULP4-206ENST00000616856 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
TULP4-206ENST00000616856 RFX5P48382 616 aaPredicted RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 COL9A3Q14050 684 aaPredicted RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 TTC14Q96N46 770 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 DIAPH3Q9NSV4 1193 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 RBM27Q9P2N5 1060 aaKnown RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 CLCN1P35523 988 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 NASPP49321 788 aaPredicted RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 CCDC173Q0VFZ6 552 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 FAM227BQ96M60 508 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
TULP4-206ENST00000616856 RGS17Q9UGC6 210 aaPredicted RBP14.74□□□□□ -0.05
TULP4-206ENST00000616856 TAF1LQ8IZX4 1826 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms