RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 CNPY4Q8N129 248 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 ALS2Q96Q42 1657 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 TNNI3KQ59H18 835 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 VPS53Q5VIR6 699 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 DDX46Q7L014 1031 aaKnown RBP16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 MPNDQ8N594 471 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 MAP4K1Q92918 833 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 FPGT-TNNI3KV9GXZ4 949 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 KIF1AQ12756 1690 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
CACNA1C-231ENST00000616390 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
CACNA1C-231ENST00000616390 HIP1O00291 1037 aa16.59■□□□□ 0.25
CACNA1C-231ENST00000616390 IGSF3O75054 1194 aa16.59■□□□□ 0.25
CACNA1C-231ENST00000616390 F13A1P00488 732 aa16.59■□□□□ 0.25
CACNA1C-231ENST00000616390 DNM1Q05193 864 aaKnown RBP16.59■□□□□ 0.25
CACNA1C-231ENST00000616390 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 NBPF26B4DH59 902 aa16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 NBPF14Q5TI25 921 aa16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 NBPF15Q8N660 670 aa16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.25
CACNA1C-231ENST00000616390 MSNP26038 577 aaKnown RBP16.58■□□□□ 0.24
CACNA1C-231ENST00000616390 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
CACNA1C-231ENST00000616390 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
CACNA1C-231ENST00000616390 RFX5P48382 616 aaPredicted RBP16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 TIMM10P62072 90 aa16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 ZNF594Q96JF6 807 aaPredicted RBP16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 TSPY26PQ9H489 355 aa16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 COPRSQ9NQ92 184 aa16.57■□□□□ 0.24
CACNA1C-231ENST00000616390 PLBD2Q8NHP8 589 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 STRCP1A6NGW2 1772 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
CACNA1C-231ENST00000616390 PSMA5P28066 241 aa16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 ZSCAN31Q96LW9 406 aaPredicted RBP16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 SH2B1Q9NRF2 756 aaPredicted RBP16.55■□□□□ 0.24
CACNA1C-231ENST00000616390 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 COL18A1P39060 1754 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 GOLIM4O00461 696 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 TAF5LO75529 589 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 ATP5JP18859 108 aa16.54■□□□□ 0.24
CACNA1C-231ENST00000616390 PPFIA3O75145 1194 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 EVA1CP58658 441 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 FOSBP53539 338 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
CACNA1C-231ENST00000616390 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.24
CACNA1C-231ENST00000616390 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
CACNA1C-231ENST00000616390 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.24
CACNA1C-231ENST00000616390 COL15A1P39059 1388 aa16.52■□□□□ 0.24
CACNA1C-231ENST00000616390 GIMAP6Q6P9H5 292 aa16.52■□□□□ 0.23
CACNA1C-231ENST00000616390 KCNB2Q92953 911 aa16.52■□□□□ 0.23
CACNA1C-231ENST00000616390 FOXO4P98177 505 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 TOB2Q14106 344 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 TFIP11Q9UBB9 837 aaKnown RBP16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 PHF14O94880 888 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 UBE2HP62256 183 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 PUS3Q9BZE2 481 aaKnown RBP16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 CASP7P55210 303 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
CACNA1C-231ENST00000616390 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 CCDC183Q5T5S1 534 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 ZNF609O15014 1411 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 Q6ZUG5 572 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
CACNA1C-231ENST00000616390 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 JAK2O60674 1132 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 MCMDC2Q4G0Z9 681 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
CACNA1C-231ENST00000616390 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms