RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PDIA6Q15084 440 aa13.7□□□□□ -0.22
COL4A1-205ENST00000615732 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
COL4A1-205ENST00000615732 EXOC6Q8TAG9 804 aa13.7□□□□□ -0.22
COL4A1-205ENST00000615732 ABT1Q9ULW3 272 aaKnown RBP13.7□□□□□ -0.22
COL4A1-205ENST00000615732 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 EPS15P42566 896 aa13.69□□□□□ -0.22
COL4A1-205ENST00000615732 EIF6P56537 245 aaKnown RBP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
COL4A1-205ENST00000615732 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
COL4A1-205ENST00000615732 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 RBM17Q96I25 401 aaKnown RBP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 DDX21Q9NR30 783 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL4A1-205ENST00000615732 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
COL4A1-205ENST00000615732 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
COL4A1-205ENST00000615732 CRBNQ96SW2 442 aa13.68□□□□□ -0.22
COL4A1-205ENST00000615732 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
COL4A1-205ENST00000615732 ABCC4O15439 1325 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 GNAI1P63096 354 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 AOC3Q16853 763 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 PARP10Q53GL7 1025 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 UTP14AQ9BVJ6 771 aaKnown RBP13.67□□□□□ -0.22
COL4A1-205ENST00000615732 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
COL4A1-205ENST00000615732 TRAF5O00463 557 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 PPIP5K2O43314 1243 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 BCAR3O75815 825 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-205ENST00000615732 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
COL4A1-205ENST00000615732 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
COL4A1-205ENST00000615732 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
COL4A1-205ENST00000615732 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 LAMB2P55268 1798 aa13.66□□□□□ -0.22
COL4A1-205ENST00000615732 GRIPAP1Q4V328 841 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
COL4A1-205ENST00000615732 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
COL4A1-205ENST00000615732 CST9Q5W186 159 aa13.64□□□□□ -0.23
COL4A1-205ENST00000615732 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-205ENST00000615732 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-205ENST00000615732 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
COL4A1-205ENST00000615732 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
COL4A1-205ENST00000615732 GRM1Q13255 1194 aa13.63□□□□□ -0.23
COL4A1-205ENST00000615732 C20orf194Q5TEA3 1177 aa13.63□□□□□ -0.23
COL4A1-205ENST00000615732 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-205ENST00000615732 BABAM1Q9NWV8 329 aa13.63□□□□□ -0.23
COL4A1-205ENST00000615732 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
COL4A1-205ENST00000615732 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
COL4A1-205ENST00000615732 ECE1P42892 770 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 DPP8Q6V1X1 898 aaPredicted RBP13.62□□□□□ -0.23
COL4A1-205ENST00000615732 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
COL4A1-205ENST00000615732 ADARB2Q9NS39 739 aaKnown RBP13.62□□□□□ -0.23
COL4A1-205ENST00000615732 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
COL4A1-205ENST00000615732 DUOX1Q9NRD9 1551 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
COL4A1-205ENST00000615732 CHL1O00533 1208 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 MS4A1P11836 297 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 CXCL9Q07325 125 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 HSP90AB3PQ58FF7 597 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
COL4A1-205ENST00000615732 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
COL4A1-205ENST00000615732 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
COL4A1-205ENST00000615732 COL4A1P02462 1669 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 LRRC37AA6NMS7 1700 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 AOC2O75106 756 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 GMPSP49915 693 aaPredicted RBP13.6□□□□□ -0.23
COL4A1-205ENST00000615732 GRAPQ13588 217 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
COL4A1-205ENST00000615732 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
COL4A1-205ENST00000615732 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 TSKSQ9UJT2 592 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
COL4A1-205ENST00000615732 RAD17O75943 681 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
COL4A1-205ENST00000615732 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 MPNDQ8N594 471 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
COL4A1-205ENST00000615732 TAF1P21675 1872 aa13.59□□□□□ -0.23
COL4A1-205ENST00000615732 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
COL4A1-205ENST00000615732 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
COL4A1-205ENST00000615732 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms