RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
CDH5-208ENST00000614547 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 HIP1O00291 1037 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 MYOM2P54296 1465 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 A0A0D9SFI3 127 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 KCNQ3O43525 872 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 GNG11P61952 73 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
CDH5-208ENST00000614547 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
CDH5-208ENST00000614547 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDH5-208ENST00000614547 MCM6Q14566 821 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
CDH5-208ENST00000614547 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 PHACTR2O75167 634 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
CDH5-208ENST00000614547 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
CDH5-208ENST00000614547 GOLGA6L1Q8N7Z2 621 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 EPC1Q9H2F5 836 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 SNRKQ9NRH2 765 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
CDH5-208ENST00000614547 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
CDH5-208ENST00000614547 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
CDH5-208ENST00000614547 STAP2Q9UGK3 403 aa13.71□□□□□ -0.21
CDH5-208ENST00000614547 KARSQ15046 597 aaKnown RBP13.71□□□□□ -0.21
CDH5-208ENST00000614547 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.21
CDH5-208ENST00000614547 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.21
CDH5-208ENST00000614547 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
CDH5-208ENST00000614547 MYOM1P52179 1685 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 RNF17Q9BXT8 1623 aaKnown RBP13.71□□□□□ -0.22
CDH5-208ENST00000614547 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 SSH3Q8TE77 659 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 CCDC102AQ96A19 550 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 TTC14Q96N46 770 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 LGR6Q9HBX8 967 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.22
CDH5-208ENST00000614547 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.22
CDH5-208ENST00000614547 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 GOLIM4O00461 696 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
CDH5-208ENST00000614547 NFXL1Q6ZNB6 911 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
CDH5-208ENST00000614547 MED14O60244 1454 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 NEMFO60524 1076 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
CDH5-208ENST00000614547 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 GYS2P54840 703 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 TERF2Q15554 542 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 XPO4Q9C0E2 1151 aaKnown RBP13.7□□□□□ -0.22
CDH5-208ENST00000614547 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 FAM193AP78312 1265 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 MYD88Q99836 296 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
CDH5-208ENST00000614547 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 TMEM87AQ8NBN3 555 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 ZCCHC17Q9NP64 241 aaKnown RBP13.69□□□□□ -0.22
CDH5-208ENST00000614547 CHGBP05060 677 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 KIF24Q5T7B8 1368 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 GSDMDP57764 484 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 KRT32Q14532 448 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 HSP90B2PQ58FF3 399 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 EAF2Q96CJ1 260 aaPredicted RBP13.69□□□□□ -0.22
CDH5-208ENST00000614547 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
CDH5-208ENST00000614547 UBASH3AP57075 661 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 COL9A3Q14050 684 aaPredicted RBP13.68□□□□□ -0.22
CDH5-208ENST00000614547 EVCP57679 992 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
CDH5-208ENST00000614547 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 PUF60Q9UHX1 559 aaKnown RBP13.68□□□□□ -0.22
CDH5-208ENST00000614547 CTAGE5O15320 804 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 RXRAP19793 462 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
CDH5-208ENST00000614547 BICC1Q9H694 974 aaKnown RBP13.68□□□□□ -0.22
CDH5-208ENST00000614547 NEO1Q92859 1461 aa13.68□□□□□ -0.22
CDH5-208ENST00000614547 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
CDH5-208ENST00000614547 CASQ1P31415 396 aa13.67□□□□□ -0.22
CDH5-208ENST00000614547 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
CDH5-208ENST00000614547 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
CDH5-208ENST00000614547 MRPS27Q92552 414 aaKnown RBP13.67□□□□□ -0.22
CDH5-208ENST00000614547 AK7Q96M32 723 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms