RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CASP7P55210 303 aa16.68■□□□□ 0.26
MDC1-209ENST00000613547 USP44Q9H0E7 712 aa16.68■□□□□ 0.26
MDC1-209ENST00000613547 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
MDC1-209ENST00000613547 BBOX1O75936 387 aa16.67■□□□□ 0.26
MDC1-209ENST00000613547 GNAI3P08754 354 aa16.67■□□□□ 0.26
MDC1-209ENST00000613547 GRAPQ13588 217 aa16.67■□□□□ 0.26
MDC1-209ENST00000613547 GRAPLQ8TC17 118 aaPredicted RBP16.67■□□□□ 0.26
MDC1-209ENST00000613547 TNNQ9UQP3 1299 aa16.67■□□□□ 0.26
MDC1-209ENST00000613547 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 PPEF1O14829 653 aaPredicted RBP16.66■□□□□ 0.26
MDC1-209ENST00000613547 TMC4Q7Z404 712 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 ITPRIPQ8IWB1 547 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
MDC1-209ENST00000613547 CDC5LQ99459 802 aaKnown RBP16.66■□□□□ 0.26
MDC1-209ENST00000613547 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
MDC1-209ENST00000613547 LAMB2P55268 1798 aa16.66■□□□□ 0.26
MDC1-209ENST00000613547 C21orf2O43822 256 aa16.65■□□□□ 0.26
MDC1-209ENST00000613547 CC2D2BQ6DHV5 1058 aa16.65■□□□□ 0.26
MDC1-209ENST00000613547 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
MDC1-209ENST00000613547 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
MDC1-209ENST00000613547 RTL9Q8NET4 1388 aa16.64■□□□□ 0.26
MDC1-209ENST00000613547 PLIN1O60240 522 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 CSF1RP07333 972 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 FOXO4P98177 505 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 ARHGAP27Q6ZUM4 889 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
MDC1-209ENST00000613547 RPS8P62241 208 aaKnown RBP16.63■□□□□ 0.25
MDC1-209ENST00000613547 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
MDC1-209ENST00000613547 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
MDC1-209ENST00000613547 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
MDC1-209ENST00000613547 MEIS3Q99687 375 aa16.63■□□□□ 0.25
MDC1-209ENST00000613547 GREM2Q9H772 168 aa16.63■□□□□ 0.25
MDC1-209ENST00000613547 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
MDC1-209ENST00000613547 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 RLBP1P12271 317 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 ITGA6P23229 1130 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
MDC1-209ENST00000613547 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
MDC1-209ENST00000613547 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
MDC1-209ENST00000613547 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
MDC1-209ENST00000613547 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
MDC1-209ENST00000613547 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
MDC1-209ENST00000613547 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
MDC1-209ENST00000613547 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
MDC1-209ENST00000613547 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
MDC1-209ENST00000613547 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
MDC1-209ENST00000613547 SP8Q8IXZ3 490 aa16.61■□□□□ 0.25
MDC1-209ENST00000613547 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
MDC1-209ENST00000613547 GNAI2P04899 355 aa16.6■□□□□ 0.25
MDC1-209ENST00000613547 MVPQ14764 893 aaKnown RBP16.6■□□□□ 0.25
MDC1-209ENST00000613547 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
MDC1-209ENST00000613547 LRRFIP2Q9Y608 721 aaKnown RBP16.6■□□□□ 0.25
MDC1-209ENST00000613547 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
MDC1-209ENST00000613547 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
MDC1-209ENST00000613547 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
MDC1-209ENST00000613547 MPNDQ8N594 471 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
MDC1-209ENST00000613547 NFKBIEO00221 500 aa16.57■□□□□ 0.24
MDC1-209ENST00000613547 ZBTB7BO15156 539 aaPredicted RBP16.57■□□□□ 0.24
MDC1-209ENST00000613547 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
MDC1-209ENST00000613547 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
MDC1-209ENST00000613547 DPP8Q6V1X1 898 aaPredicted RBP16.57■□□□□ 0.24
MDC1-209ENST00000613547 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
MDC1-209ENST00000613547 PSMD1Q99460 953 aa16.57■□□□□ 0.24
MDC1-209ENST00000613547 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
MDC1-209ENST00000613547 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
MDC1-209ENST00000613547 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
MDC1-209ENST00000613547 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
MDC1-209ENST00000613547 LMNB1P20700 586 aa16.55■□□□□ 0.24
MDC1-209ENST00000613547 RASSF7Q02833 373 aa16.55■□□□□ 0.24
MDC1-209ENST00000613547 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
MDC1-209ENST00000613547 MYH3P11055 1940 aa16.55■□□□□ 0.24
MDC1-209ENST00000613547 XDHP47989 1333 aa16.54■□□□□ 0.24
MDC1-209ENST00000613547 MTX1Q13505 466 aa16.54■□□□□ 0.24
MDC1-209ENST00000613547 ANKRD2Q9GZV1 360 aa16.54■□□□□ 0.24
MDC1-209ENST00000613547 SRGAP3O43295 1099 aa16.53■□□□□ 0.24
MDC1-209ENST00000613547 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
MDC1-209ENST00000613547 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
MDC1-209ENST00000613547 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
MDC1-209ENST00000613547 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
MDC1-209ENST00000613547 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
MDC1-209ENST00000613547 CACNA1SQ13698 1873 aa16.52■□□□□ 0.24
MDC1-209ENST00000613547 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
MDC1-209ENST00000613547 GPSM2P81274 684 aa16.52■□□□□ 0.24
MDC1-209ENST00000613547 C9orf131Q5VYM1 1079 aa16.52■□□□□ 0.24
MDC1-209ENST00000613547 EYA3Q99504 573 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms