RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
SRGAP2C-204ENST00000613462 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.2
SRGAP2C-204ENST00000613462 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 GNAI3P08754 354 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 YBX3P16989 372 aaKnown RBP eCLIP16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 KCNA3P22001 575 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 CTSWP56202 376 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
SRGAP2C-204ENST00000613462 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 RRP1P56182 461 aaKnown RBP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
SRGAP2C-204ENST00000613462 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
SRGAP2C-204ENST00000613462 RLBP1P12271 317 aa16.3■□□□□ 0.2
SRGAP2C-204ENST00000613462 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
SRGAP2C-204ENST00000613462 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
SRGAP2C-204ENST00000613462 PCNTO95613 3336 aa16.29■□□□□ 0.2
SRGAP2C-204ENST00000613462 PLIN1O60240 522 aa16.29■□□□□ 0.2
SRGAP2C-204ENST00000613462 TMC4Q7Z404 712 aa16.29■□□□□ 0.2
SRGAP2C-204ENST00000613462 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
SRGAP2C-204ENST00000613462 PANK1Q8TE04 598 aa16.29■□□□□ 0.2
SRGAP2C-204ENST00000613462 FOXO4P98177 505 aa16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 MVPQ14764 893 aaKnown RBP16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 MEIS3Q99687 375 aa16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 DDX19BQ9UMR2 479 aa16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
SRGAP2C-204ENST00000613462 CSF1RP07333 972 aa16.27■□□□□ 0.2
SRGAP2C-204ENST00000613462 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
SRGAP2C-204ENST00000613462 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
SRGAP2C-204ENST00000613462 CDC5LQ99459 802 aaKnown RBP16.27■□□□□ 0.2
SRGAP2C-204ENST00000613462 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
SRGAP2C-204ENST00000613462 BBOX1O75936 387 aa16.26■□□□□ 0.19
SRGAP2C-204ENST00000613462 GRAPQ13588 217 aa16.26■□□□□ 0.19
SRGAP2C-204ENST00000613462 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
SRGAP2C-204ENST00000613462 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
SRGAP2C-204ENST00000613462 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
SRGAP2C-204ENST00000613462 SBF1O95248 1867 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 GNAI2P04899 355 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 GREM2Q9H772 168 aa16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
SRGAP2C-204ENST00000613462 ANKRD18BA2A2Z9 1011 aa16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 ZBTB7BO15156 539 aaPredicted RBP16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 FAM161AQ3B820 660 aa16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 LRRFIP2Q9Y608 721 aaKnown RBP16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 LTBP1Q14766 1721 aa16.24■□□□□ 0.19
SRGAP2C-204ENST00000613462 ITGA6P23229 1130 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 C20orf194Q5TEA3 1177 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 ANKRD18AQ8IVF6 992 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 COL4A1P02462 1669 aa16.23■□□□□ 0.19
SRGAP2C-204ENST00000613462 HSPA6P17066 643 aa16.22■□□□□ 0.19
SRGAP2C-204ENST00000613462 IGHMBP2P38935 993 aaKnown RBP16.22■□□□□ 0.19
SRGAP2C-204ENST00000613462 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
SRGAP2C-204ENST00000613462 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
SRGAP2C-204ENST00000613462 MTX1Q13505 466 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 SP8Q8IXZ3 490 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 RTKN2Q8IZC4 609 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 C7orf43Q8WVR3 580 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
SRGAP2C-204ENST00000613462 C21orf2O43822 256 aa16.2■□□□□ 0.18
SRGAP2C-204ENST00000613462 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
SRGAP2C-204ENST00000613462 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
SRGAP2C-204ENST00000613462 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
SRGAP2C-204ENST00000613462 AAMPQ13685 434 aa16.19■□□□□ 0.18
SRGAP2C-204ENST00000613462 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
SRGAP2C-204ENST00000613462 TIAM2Q8IVF5 1701 aa16.18■□□□□ 0.18
SRGAP2C-204ENST00000613462 LTBP3Q9NS15 1303 aa16.18■□□□□ 0.18
SRGAP2C-204ENST00000613462 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
SRGAP2C-204ENST00000613462 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms