RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 CPA1P15085 419 aa15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 RABL6Q3YEC7 729 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 KIF20AO95235 890 aa15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 PTH1RQ03431 593 aa15.11■□□□□ 0.01
PCDHGA4-202ENST00000612927 PTMAP06454 111 aaKnown RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 ZBTB3Q9H5J0 574 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 COPRSQ9NQ92 184 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 COL14A1Q05707 1796 aaKnown RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 BRD1O95696 1058 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 EPB41L2O43491 1005 aaKnown RBP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 ARID3AQ99856 593 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDHGA4-202ENST00000612927 TJP1Q07157 1748 aa15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 PIBF1Q8WXW3 757 aa15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 PIGBQ92521 554 aa15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 SYAP1Q96A49 352 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 INTS4Q96HW7 963 aaKnown RBP15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 H7C1W4 665 aa15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 NSFL1CQ9UNZ2 370 aaKnown RBP15.09■□□□□ 0.01
PCDHGA4-202ENST00000612927 DTNBO60941 627 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 AK2P54819 239 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 TTC14Q96N46 770 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
PCDHGA4-202ENST00000612927 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
PCDHGA4-202ENST00000612927 CASTP20810 708 aaKnown RBP15.08■□□□□ 0
PCDHGA4-202ENST00000612927 FOXO4P98177 505 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
PCDHGA4-202ENST00000612927 LMBR1LQ6UX01 489 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 EVI5LQ96CN4 794 aa15.08■□□□□ 0
PCDHGA4-202ENST00000612927 LETM1O95202 739 aaPredicted RBP15.07■□□□□ 0
PCDHGA4-202ENST00000612927 UVSSAQ2YD98 709 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 ADCK5Q3MIX3 580 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 DNTTIP2Q5QJE6 756 aaKnown RBP15.07■□□□□ 0
PCDHGA4-202ENST00000612927 RUFY3Q7L099 469 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 COL22A1Q8NFW1 1626 aaPredicted RBP15.07■□□□□ 0
PCDHGA4-202ENST00000612927 PHF14O94880 888 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 TFCP2Q12800 502 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 DNAJC10Q8IXB1 793 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 ZNF710Q8N1W2 664 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 RUFY2Q8WXA3 655 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 ATG3Q9NT62 314 aa15.07■□□□□ 0
PCDHGA4-202ENST00000612927 NMIQ13287 307 aaPredicted RBP15.06■□□□□ 0
PCDHGA4-202ENST00000612927 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
PCDHGA4-202ENST00000612927 LARGE1O95461 756 aa15.06■□□□□ 0
PCDHGA4-202ENST00000612927 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
PCDHGA4-202ENST00000612927 JAKMIP1Q96N16 626 aaKnown RBP15.06■□□□□ 0
PCDHGA4-202ENST00000612927 TNNI3KQ59H18 835 aa15.05■□□□□ 0
PCDHGA4-202ENST00000612927 GDPD2Q9HCC8 539 aa15.05■□□□□ 0
PCDHGA4-202ENST00000612927 DBNLQ9UJU6 430 aaKnown RBP15.05■□□□□ 0
PCDHGA4-202ENST00000612927 CHMP3Q9Y3E7 222 aa15.05■□□□□ 0
PCDHGA4-202ENST00000612927 ZNF330Q9Y3S2 320 aaPredicted RBP15.05■□□□□ 0
PCDHGA4-202ENST00000612927 FPGT-TNNI3KV9GXZ4 949 aa15.05■□□□□ 0
PCDHGA4-202ENST00000612927 ITGB4P16144 1822 aa15.05■□□□□ 0
PCDHGA4-202ENST00000612927 RPAP1Q9BWH6 1393 aaPredicted RBP15.05■□□□□ -0
PCDHGA4-202ENST00000612927 CCDC171Q6TFL3 1326 aa15.05■□□□□ -0
PCDHGA4-202ENST00000612927 A0A0D9SFI3 127 aa15.05■□□□□ -0
PCDHGA4-202ENST00000612927 PAXIP1Q6ZW49 1069 aaPredicted RBP15.05■□□□□ -0
PCDHGA4-202ENST00000612927 CCDC191Q8NCU4 936 aa15.05■□□□□ -0
PCDHGA4-202ENST00000612927 RNF214Q8ND24 703 aa15.05■□□□□ -0
PCDHGA4-202ENST00000612927 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
PCDHGA4-202ENST00000612927 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
PCDHGA4-202ENST00000612927 NOLC1Q14978 699 aaKnown RBP eCLIP15.04■□□□□ -0
PCDHGA4-202ENST00000612927 FSD1Q9BTV5 496 aa15.04■□□□□ -0
PCDHGA4-202ENST00000612927 SPTLC3Q9NUV7 552 aa15.04■□□□□ -0
PCDHGA4-202ENST00000612927 KIF3AQ9Y496 699 aa15.04■□□□□ -0
PCDHGA4-202ENST00000612927 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
PCDHGA4-202ENST00000612927 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
PCDHGA4-202ENST00000612927 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
PCDHGA4-202ENST00000612927 BCL9O00512 1426 aa15.03■□□□□ -0
PCDHGA4-202ENST00000612927 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
PCDHGA4-202ENST00000612927 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
PCDHGA4-202ENST00000612927 KCNJ4P48050 445 aa15.02■□□□□ -0
PCDHGA4-202ENST00000612927 NECTIN1Q15223 517 aa15.02□□□□□ -0.01
PCDHGA4-202ENST00000612927 SLC4A9Q96Q91 983 aa15.02□□□□□ -0.01
PCDHGA4-202ENST00000612927 DBNDD2Q9BQY9 259 aa15.02□□□□□ -0.01
PCDHGA4-202ENST00000612927 TEX13AQ9BXU3 409 aaPredicted RBP15.02□□□□□ -0.01
PCDHGA4-202ENST00000612927 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
PCDHGA4-202ENST00000612927 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 TCIRG1Q13488 830 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 CREB3L3Q68CJ9 461 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 ZNF589Q86UQ0 364 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 CCDC83Q8IWF9 413 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 PDRG1Q9NUG6 133 aa15.01□□□□□ -0.01
PCDHGA4-202ENST00000612927 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms