RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 TTLL6Q8N841 843 aa14.43□□□□□ -0.1
CCL3L3-201ENST00000612839 ZBTB38Q8NAP3 1195 aaPredicted RBP14.43□□□□□ -0.1
CCL3L3-201ENST00000612839 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
CCL3L3-201ENST00000612839 CHD4Q14839 1912 aa14.42□□□□□ -0.1
CCL3L3-201ENST00000612839 NPR1P16066 1061 aa14.42□□□□□ -0.1
CCL3L3-201ENST00000612839 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
CCL3L3-201ENST00000612839 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
CCL3L3-201ENST00000612839 NLRP3Q96P20 1036 aa14.42□□□□□ -0.1
CCL3L3-201ENST00000612839 PTPRCP08575 1304 aa14.41□□□□□ -0.1
CCL3L3-201ENST00000612839 PCCAP05165 728 aaPredicted RBP14.41□□□□□ -0.1
CCL3L3-201ENST00000612839 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
CCL3L3-201ENST00000612839 BEND3Q5T5X7 828 aa14.41□□□□□ -0.1
CCL3L3-201ENST00000612839 CNKSR1Q969H4 720 aa14.41□□□□□ -0.1
CCL3L3-201ENST00000612839 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 HOXA10P31260 410 aaPredicted RBP14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 GCKRQ14397 625 aa14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 PRPF40BQ6NWY9 871 aaKnown RBP14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 JARID2Q92833 1246 aaPredicted RBP14.4□□□□□ -0.1
CCL3L3-201ENST00000612839 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
CCL3L3-201ENST00000612839 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
CCL3L3-201ENST00000612839 TAF1P21675 1872 aa14.39□□□□□ -0.11
CCL3L3-201ENST00000612839 ALDH1B1P30837 517 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 MYH3P11055 1940 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 CDHR2Q9BYE9 1310 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 H7C1W4 665 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 C21orf2O43822 256 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 BCAR3O75815 825 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 SF3B3Q15393 1217 aaKnown RBP14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
CCL3L3-201ENST00000612839 FER1L6Q2WGJ9 1857 aa14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 CASP7P55210 303 aa14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 UBE3BQ7Z3V4 1068 aa14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 RBM17Q96I25 401 aaKnown RBP14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 CRAMP1Q96RY5 1269 aa14.37□□□□□ -0.11
CCL3L3-201ENST00000612839 SBF1O95248 1867 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 PDE8AO60658 829 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 ALDH1L1O75891 902 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 COL4A1P02462 1669 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 ABCC4O15439 1325 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
CCL3L3-201ENST00000612839 HSP90B1P14625 803 aaKnown RBP14.35□□□□□ -0.11
CCL3L3-201ENST00000612839 OLFM4Q6UX06 510 aa14.35□□□□□ -0.11
CCL3L3-201ENST00000612839 NFKBIEO00221 500 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 GRM8O00222 908 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 SLC51AQ86UW1 340 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 ARHGAP45Q92619 1136 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 YTHDC1Q96MU7 727 aaKnown RBP14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 CCDC88AQ3V6T2 1871 aa14.34□□□□□ -0.11
CCL3L3-201ENST00000612839 CTSWP56202 376 aa14.33□□□□□ -0.12
CCL3L3-201ENST00000612839 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
CCL3L3-201ENST00000612839 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.12
CCL3L3-201ENST00000612839 API5Q9BZZ5 524 aaKnown RBP14.33□□□□□ -0.12
CCL3L3-201ENST00000612839 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 PRELPP51888 382 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 RASSF7Q02833 373 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 GRAPQ13588 217 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 GRAPLQ8TC17 118 aaPredicted RBP14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 CCDC85AQ96PX6 553 aaPredicted RBP14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 LRRC37AA6NMS7 1700 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 UTYO14607 1347 aa14.32□□□□□ -0.12
CCL3L3-201ENST00000612839 BBOX1O75936 387 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 NBPF7P0C2Y1 421 aaPredicted RBP14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 TRIM27P14373 513 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 CCDC93Q567U6 631 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 YY1P25490 414 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 FOXO4P98177 505 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 ATF7IPQ6VMQ6 1270 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 TNNQ9UQP3 1299 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 ATP6V0A2Q9Y487 856 aa14.31□□□□□ -0.12
CCL3L3-201ENST00000612839 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 CSF1RP07333 972 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 CCT4P50991 539 aaKnown RBP14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 TAOK3Q9H2K8 898 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 GREM2Q9H772 168 aa14.3□□□□□ -0.12
CCL3L3-201ENST00000612839 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 RPS8P62241 208 aaKnown RBP14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 RTKN2Q8IZC4 609 aa14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 SPEF2Q9C093 1822 aa14.29□□□□□ -0.12
CCL3L3-201ENST00000612839 LMNB1P20700 586 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms