RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 SOGA3Q5TF21 947 aa15.05■□□□□ -0
LINC00272-202ENST00000612603 CRAMP1Q96RY5 1269 aa15.05■□□□□ -0
LINC00272-202ENST00000612603 KIF16BQ96L93 1317 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 CDHR2Q9BYE9 1310 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 HOXA10P31260 410 aaPredicted RBP15.04■□□□□ -0
LINC00272-202ENST00000612603 GRAPQ13588 217 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 CCDC152Q4G0S7 254 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
LINC00272-202ENST00000612603 TAOK3Q9H2K8 898 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 SEC31BQ9NQW1 1179 aa15.04■□□□□ -0
LINC00272-202ENST00000612603 H7C1W4 665 aa15.03■□□□□ -0
LINC00272-202ENST00000612603 NFKBIEO00221 500 aa15.03■□□□□ -0
LINC00272-202ENST00000612603 GRM8O00222 908 aa15.03■□□□□ -0
LINC00272-202ENST00000612603 CTSWP56202 376 aa15.03■□□□□ -0
LINC00272-202ENST00000612603 CELF1Q92879 486 aaKnown RBP15.03■□□□□ -0
LINC00272-202ENST00000612603 API5Q9BZZ5 524 aaKnown RBP15.03■□□□□ -0
LINC00272-202ENST00000612603 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
LINC00272-202ENST00000612603 ALDH1L1O75891 902 aa15.02■□□□□ -0
LINC00272-202ENST00000612603 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
LINC00272-202ENST00000612603 CLUAP1Q96AJ1 413 aa15.02■□□□□ -0
LINC00272-202ENST00000612603 ZNF277Q9NRM2 450 aaPredicted RBP15.02■□□□□ -0
LINC00272-202ENST00000612603 COL4A1P02462 1669 aa15.02□□□□□ -0.01
LINC00272-202ENST00000612603 LMNB1P20700 586 aa15.01□□□□□ -0.01
LINC00272-202ENST00000612603 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
LINC00272-202ENST00000612603 GREM2Q9H772 168 aa15.01□□□□□ -0.01
LINC00272-202ENST00000612603 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
LINC00272-202ENST00000612603 BBOX1O75936 387 aa15□□□□□ -0.01
LINC00272-202ENST00000612603 FAM161AQ3B820 660 aa15□□□□□ -0.01
LINC00272-202ENST00000612603 C7orf43Q8WVR3 580 aa15□□□□□ -0.01
LINC00272-202ENST00000612603 TNNQ9UQP3 1299 aa15□□□□□ -0.01
LINC00272-202ENST00000612603 ATP6V0A2Q9Y487 856 aa15□□□□□ -0.01
LINC00272-202ENST00000612603 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
LINC00272-202ENST00000612603 PRELPP51888 382 aa14.99□□□□□ -0.01
LINC00272-202ENST00000612603 CASP7P55210 303 aa14.99□□□□□ -0.01
LINC00272-202ENST00000612603 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
LINC00272-202ENST00000612603 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
LINC00272-202ENST00000612603 DPP8Q6V1X1 898 aaPredicted RBP14.99□□□□□ -0.01
LINC00272-202ENST00000612603 ANKRD18AQ8IVF6 992 aa14.99□□□□□ -0.01
LINC00272-202ENST00000612603 TTLL11Q8NHH1 800 aa14.99□□□□□ -0.01
LINC00272-202ENST00000612603 DICER1Q9UPY3 1922 aaKnown RBP14.99□□□□□ -0.01
LINC00272-202ENST00000612603 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
LINC00272-202ENST00000612603 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
LINC00272-202ENST00000612603 CC2D2BQ6DHV5 1058 aa14.98□□□□□ -0.01
LINC00272-202ENST00000612603 SP8Q8IXZ3 490 aa14.98□□□□□ -0.01
LINC00272-202ENST00000612603 MPNDQ8N594 471 aa14.98□□□□□ -0.01
LINC00272-202ENST00000612603 ZNF784Q8NCA9 323 aaPredicted RBP14.98□□□□□ -0.01
LINC00272-202ENST00000612603 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
LINC00272-202ENST00000612603 CDC5LQ99459 802 aaKnown RBP14.98□□□□□ -0.01
LINC00272-202ENST00000612603 TRIM27P14373 513 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 ITGA6P23229 1130 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 IGHMBP2P38935 993 aaKnown RBP14.97□□□□□ -0.01
LINC00272-202ENST00000612603 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
LINC00272-202ENST00000612603 TAF7LQ5H9L4 462 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 EPHA10Q5JZY3 1008 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 ATF7IPQ6VMQ6 1270 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 FTSJ3Q8IY81 847 aaKnown RBP14.97□□□□□ -0.01
LINC00272-202ENST00000612603 ANKIB1Q9P2G1 1089 aa14.97□□□□□ -0.01
LINC00272-202ENST00000612603 NSFL1CQ9UNZ2 370 aaKnown RBP14.97□□□□□ -0.01
LINC00272-202ENST00000612603 ANKRD18BA2A2Z9 1011 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 LRRC37AA6NMS7 1700 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 C6orf229H3BNL8 230 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 IARSP41252 1262 aaKnown RBP14.96□□□□□ -0.01
LINC00272-202ENST00000612603 TMC4Q7Z404 712 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 LARGE2Q8N3Y3 721 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
LINC00272-202ENST00000612603 GPBP1L1Q9HC44 474 aaPredicted RBP14.96□□□□□ -0.01
LINC00272-202ENST00000612603 LTBP3Q9NS15 1303 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 PPIP5K2O43314 1243 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
LINC00272-202ENST00000612603 FOXO4P98177 505 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
LINC00272-202ENST00000612603 AOC3Q16853 763 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
LINC00272-202ENST00000612603 MPHOSPH8Q99549 860 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
LINC00272-202ENST00000612603 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
LINC00272-202ENST00000612603 RIMBP2O15034 1052 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 GPSM2P81274 684 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 CCDC57Q2TAC2 916 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 JDP2Q8WYK2 163 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 ZNF594Q96JF6 807 aaPredicted RBP14.94□□□□□ -0.02
LINC00272-202ENST00000612603 PSMD1Q99460 953 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 USP44Q9H0E7 712 aa14.94□□□□□ -0.02
LINC00272-202ENST00000612603 UFL1O94874 794 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 GRIPAP1Q4V328 841 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 ITPRIPQ8IWB1 547 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 SUPT20HQ8NEM7 779 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 MEIS3Q99687 375 aa14.93□□□□□ -0.02
LINC00272-202ENST00000612603 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 G3V3G9 751 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 PLIN1O60240 522 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 CSF1RP07333 972 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 NIM1KQ8IY84 436 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
LINC00272-202ENST00000612603 CNNM1Q9NRU3 951 aa14.92□□□□□ -0.02
LINC00272-202ENST00000612603 GGA1Q9UJY5 639 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms