RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 DCCP43146 1447 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 PUS3Q9BZE2 481 aaKnown RBP16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 CPDO75976 1380 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 VPS53Q5VIR6 699 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 SLAIN2Q9P270 581 aa16.88■□□□□ 0.29
PCDHGA3-202ENST00000612467 MED23Q9ULK4 1368 aa16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 TAF5LO75529 589 aa16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
PCDHGA3-202ENST00000612467 ZNF609O15014 1411 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 F13A1P00488 732 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 MPNDQ8N594 471 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 KCNB2Q92953 911 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
PCDHGA3-202ENST00000612467 GOLIM4O00461 696 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 IL2RBP14784 551 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 ATP5JP18859 108 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 EVA1CP58658 441 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 H7C1W4 665 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
PCDHGA3-202ENST00000612467 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
PCDHGA3-202ENST00000612467 BLOC1S2Q6QNY1 142 aa16.84■□□□□ 0.29
PCDHGA3-202ENST00000612467 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
PCDHGA3-202ENST00000612467 MBD3O95983 291 aa16.84■□□□□ 0.29
PCDHGA3-202ENST00000612467 CLCN1P35523 988 aa16.84■□□□□ 0.29
PCDHGA3-202ENST00000612467 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.29
PCDHGA3-202ENST00000612467 TM6SF1Q9BZW5 370 aa16.83■□□□□ 0.29
PCDHGA3-202ENST00000612467 HIP1O00291 1037 aa16.83■□□□□ 0.28
PCDHGA3-202ENST00000612467 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
PCDHGA3-202ENST00000612467 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
PCDHGA3-202ENST00000612467 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
PCDHGA3-202ENST00000612467 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 FOSBP53539 338 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 JAK2O60674 1132 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 CYP21A2P08686 494 aa16.82■□□□□ 0.28
PCDHGA3-202ENST00000612467 STOX1Q6ZVD7 989 aa16.81■□□□□ 0.28
PCDHGA3-202ENST00000612467 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA3-202ENST00000612467 HAUS7Q99871 368 aa16.81■□□□□ 0.28
PCDHGA3-202ENST00000612467 GPTP24298 496 aa16.81■□□□□ 0.28
PCDHGA3-202ENST00000612467 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
PCDHGA3-202ENST00000612467 LAMB4A4D0S4 1761 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 ADORA1P30542 326 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 TJP1Q07157 1748 aa16.8■□□□□ 0.28
PCDHGA3-202ENST00000612467 PIGBQ92521 554 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 A0A1B0GUL7 405 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 PSMA5P28066 241 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
PCDHGA3-202ENST00000612467 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 Q6ZUG5 572 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 PAG1Q9NWQ8 432 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 PARP4Q9UKK3 1724 aaKnown RBP16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 MCMDC2Q4G0Z9 681 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 NUP188Q5SRE5 1749 aa16.78■□□□□ 0.28
PCDHGA3-202ENST00000612467 ABCC6O95255 1503 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 EYA2O00167 538 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 FKBP4Q02790 459 aaKnown RBP eCLIP16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 HLFQ16534 295 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 TTLL5Q6EMB2 1281 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 SCARF1Q14162 830 aa16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 NKX1-1Q15270 411 aaPredicted RBP16.77■□□□□ 0.28
PCDHGA3-202ENST00000612467 JCADQ9P266 1359 aa16.77■□□□□ 0.27
PCDHGA3-202ENST00000612467 A0A0G2JS52 829 aa16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
PCDHGA3-202ENST00000612467 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms