RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SCN4AP35499 1836 aa23.38■■□□□ 1.33
VCX3A-203ENST00000612369 ZNF541Q9H0D2 1346 aa23.37■■□□□ 1.33
VCX3A-203ENST00000612369 SLC4A2P04920 1241 aa23.37■■□□□ 1.33
VCX3A-203ENST00000612369 PCCAP05165 728 aaPredicted RBP23.37■■□□□ 1.33
VCX3A-203ENST00000612369 GPC2Q8N158 579 aa23.37■■□□□ 1.33
VCX3A-203ENST00000612369 PI4KAP2A4QPH2 592 aa23.36■■□□□ 1.33
VCX3A-203ENST00000612369 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
VCX3A-203ENST00000612369 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
VCX3A-203ENST00000612369 DPP8Q6V1X1 898 aaPredicted RBP23.36■■□□□ 1.33
VCX3A-203ENST00000612369 MPNDQ8N594 471 aa23.36■■□□□ 1.33
VCX3A-203ENST00000612369 PI4KAP1Q8N8J0 262 aa23.36■■□□□ 1.33
VCX3A-203ENST00000612369 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
VCX3A-203ENST00000612369 MYH16Q9H6N6 1097 aa23.35■■□□□ 1.33
VCX3A-203ENST00000612369 CACNA1FO60840 1977 aa23.34■■□□□ 1.33
VCX3A-203ENST00000612369 PPIP5K2O43314 1243 aa23.34■■□□□ 1.33
VCX3A-203ENST00000612369 VAMP4O75379 141 aa23.34■■□□□ 1.33
VCX3A-203ENST00000612369 EXOSC9Q06265 439 aaKnown RBP23.33■■□□□ 1.33
VCX3A-203ENST00000612369 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
VCX3A-203ENST00000612369 NIM1KQ8IY84 436 aa23.33■■□□□ 1.33
VCX3A-203ENST00000612369 TAF1DQ9H5J8 278 aaPredicted RBP23.33■■□□□ 1.33
VCX3A-203ENST00000612369 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
VCX3A-203ENST00000612369 PDE8AO60658 829 aa23.32■■□□□ 1.32
VCX3A-203ENST00000612369 CHADLQ6NUI6 762 aa23.32■■□□□ 1.32
VCX3A-203ENST00000612369 G2E3Q7L622 706 aa23.32■■□□□ 1.32
VCX3A-203ENST00000612369 CELF1Q92879 486 aaKnown RBP23.32■■□□□ 1.32
VCX3A-203ENST00000612369 CDHR2Q9BYE9 1310 aa23.32■■□□□ 1.32
VCX3A-203ENST00000612369 COL4A5P29400 1685 aa23.32■■□□□ 1.32
VCX3A-203ENST00000612369 TAF1P21675 1872 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 IGKV5-2P06315 115 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 FLIIQ13045 1269 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 AOC3Q16853 763 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
VCX3A-203ENST00000612369 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
VCX3A-203ENST00000612369 RPS8P62241 208 aaKnown RBP23.3■■□□□ 1.32
VCX3A-203ENST00000612369 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
VCX3A-203ENST00000612369 LDHDQ86WU2 507 aa23.3■■□□□ 1.32
VCX3A-203ENST00000612369 DNAJC5GQ8N7S2 189 aa23.3■■□□□ 1.32
VCX3A-203ENST00000612369 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
VCX3A-203ENST00000612369 EPHX2P34913 555 aa23.29■■□□□ 1.32
VCX3A-203ENST00000612369 ZNRF3Q9ULT6 936 aa23.29■■□□□ 1.32
VCX3A-203ENST00000612369 GJA3Q9Y6H8 435 aa23.29■■□□□ 1.32
VCX3A-203ENST00000612369 FKBP5Q13451 457 aaPredicted RBP23.28■■□□□ 1.32
VCX3A-203ENST00000612369 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
VCX3A-203ENST00000612369 NEURL1BA8MQ27 555 aa23.27■■□□□ 1.32
VCX3A-203ENST00000612369 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
VCX3A-203ENST00000612369 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
VCX3A-203ENST00000612369 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
VCX3A-203ENST00000612369 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
VCX3A-203ENST00000612369 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
VCX3A-203ENST00000612369 CWF19L2Q2TBE0 894 aaKnown RBP23.25■■□□□ 1.31
VCX3A-203ENST00000612369 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
VCX3A-203ENST00000612369 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
VCX3A-203ENST00000612369 DUOX1Q9NRD9 1551 aa23.24■■□□□ 1.31
VCX3A-203ENST00000612369 H7C1W4 665 aa23.24■■□□□ 1.31
VCX3A-203ENST00000612369 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
VCX3A-203ENST00000612369 EAPPQ56P03 285 aaPredicted RBP23.24■■□□□ 1.31
VCX3A-203ENST00000612369 LINS1Q8NG48 757 aa23.24■■□□□ 1.31
VCX3A-203ENST00000612369 SCNN1DP51172 638 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 CTSWP56202 376 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 GPSM2P81274 684 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 CXCL9Q07325 125 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 GCKRQ14397 625 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 EYA3Q99504 573 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 PODXL2Q9NZ53 605 aa23.23■■□□□ 1.31
VCX3A-203ENST00000612369 C6orf229H3BNL8 230 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 HTRA3P83110 453 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 TNIP1Q15025 636 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 CIAPIN1Q6FI81 312 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 ANKRD18AQ8IVF6 992 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 CDC5LQ99459 802 aaKnown RBP23.22■■□□□ 1.31
VCX3A-203ENST00000612369 CLEC11AQ9Y240 323 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 COL4A1P02462 1669 aa23.22■■□□□ 1.31
VCX3A-203ENST00000612369 POLLQ9UGP5 575 aa23.21■■□□□ 1.31
VCX3A-203ENST00000612369 RTL9Q8NET4 1388 aa23.21■■□□□ 1.31
VCX3A-203ENST00000612369 ADAMTSL1Q8N6G6 1762 aa23.21■■□□□ 1.31
VCX3A-203ENST00000612369 USP50Q70EL3 339 aaPredicted RBP23.2■■□□□ 1.3
VCX3A-203ENST00000612369 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
VCX3A-203ENST00000612369 TBC1D16Q8TBP0 767 aa23.2■■□□□ 1.3
VCX3A-203ENST00000612369 CCDC85AQ96PX6 553 aaPredicted RBP23.2■■□□□ 1.3
VCX3A-203ENST00000612369 PLA2G12BQ9BX93 195 aa23.2■■□□□ 1.3
VCX3A-203ENST00000612369 MYH3P11055 1940 aa23.2■■□□□ 1.3
VCX3A-203ENST00000612369 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 PASKQ96RG2 1323 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 E9PSI1 815 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 EPS15P42566 896 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 GPRC5DQ9NZD1 345 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 ANKIB1Q9P2G1 1089 aa23.19■■□□□ 1.3
VCX3A-203ENST00000612369 ITGBL1O95965 494 aaPredicted RBP23.18■■□□□ 1.3
VCX3A-203ENST00000612369 ZC3H12CQ9C0D7 883 aaKnown RBP23.18■■□□□ 1.3
VCX3A-203ENST00000612369 CREBZFQ9NS37 354 aa23.18■■□□□ 1.3
VCX3A-203ENST00000612369 YDJCA8MPS7 323 aa23.17■■□□□ 1.3
VCX3A-203ENST00000612369 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
VCX3A-203ENST00000612369 CASP7P55210 303 aa23.17■■□□□ 1.3
VCX3A-203ENST00000612369 JMYQ8N9B5 988 aa23.17■■□□□ 1.3
VCX3A-203ENST00000612369 GREM2Q9H772 168 aa23.17■■□□□ 1.3
VCX3A-203ENST00000612369 ADARB2Q9NS39 739 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms