RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TFCP2Q12800 502 aa15.09■□□□□ 0.01
CBWD1-220ENST00000612045 IFIT5Q13325 482 aaKnown RBP15.09■□□□□ 0.01
CBWD1-220ENST00000612045 TRAPPC3LQ5T215 181 aa15.09■□□□□ 0.01
CBWD1-220ENST00000612045 ATG9AQ7Z3C6 839 aa15.09■□□□□ 0.01
CBWD1-220ENST00000612045 UPF2Q9HAU5 1272 aaKnown RBP15.09■□□□□ 0.01
CBWD1-220ENST00000612045 EYA2O00167 538 aa15.08■□□□□ 0.01
CBWD1-220ENST00000612045 CIAO1O76071 339 aa15.08■□□□□ 0.01
CBWD1-220ENST00000612045 PROM2Q8N271 834 aa15.08■□□□□ 0.01
CBWD1-220ENST00000612045 GREM2Q9H772 168 aa15.08■□□□□ 0.01
CBWD1-220ENST00000612045 TUBGCP6Q96RT7 1819 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 PLSCR1O15162 318 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 PHF14O94880 888 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
CBWD1-220ENST00000612045 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0
CBWD1-220ENST00000612045 RFC4P35249 363 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 TXNRD1Q16881 649 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 TBC1D9BQ66K14 1250 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 GPATCH3Q96I76 525 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 FBXO3Q9UK99 471 aa15.08■□□□□ 0
CBWD1-220ENST00000612045 ITGA6P23229 1130 aa15.07■□□□□ 0
CBWD1-220ENST00000612045 MFAP1P55081 439 aaKnown RBP15.07■□□□□ 0
CBWD1-220ENST00000612045 LRRC24Q50LG9 513 aa15.07■□□□□ 0
CBWD1-220ENST00000612045 TNNI3KQ59H18 835 aa15.07■□□□□ 0
CBWD1-220ENST00000612045 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
CBWD1-220ENST00000612045 CCDC8Q9H0W5 538 aaPredicted RBP15.07■□□□□ 0
CBWD1-220ENST00000612045 FPGT-TNNI3KV9GXZ4 949 aa15.07■□□□□ 0
CBWD1-220ENST00000612045 C4AP0C0L4 1744 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 TRIM6-TRIM34B2RNG4 842 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 ERC2O15083 957 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
CBWD1-220ENST00000612045 APBA3O96018 575 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 HMGB2P26583 209 aaKnown RBP15.06■□□□□ 0
CBWD1-220ENST00000612045 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 PUS3Q9BZE2 481 aaKnown RBP15.06■□□□□ 0
CBWD1-220ENST00000612045 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
CBWD1-220ENST00000612045 UBR3Q6ZT12 1888 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
CBWD1-220ENST00000612045 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 SETDB2Q96T68 719 aa15.06■□□□□ 0
CBWD1-220ENST00000612045 DDX60Q8IY21 1712 aaKnown RBP15.05■□□□□ 0
CBWD1-220ENST00000612045 RILPL2Q969X0 211 aa15.05■□□□□ -0
CBWD1-220ENST00000612045 TBC1D32Q96NH3 1257 aa15.05■□□□□ -0
CBWD1-220ENST00000612045 GPR108Q9NPR9 543 aa15.05■□□□□ -0
CBWD1-220ENST00000612045 LAMB2P55268 1798 aa15.05■□□□□ -0
CBWD1-220ENST00000612045 SSFA2P28290 1259 aa15.04■□□□□ -0
CBWD1-220ENST00000612045 ERFEQ4G0M1 354 aa15.04■□□□□ -0
CBWD1-220ENST00000612045 CASC1Q6TDU7 716 aa15.04■□□□□ -0
CBWD1-220ENST00000612045 DBNLQ9UJU6 430 aaKnown RBP15.04■□□□□ -0
CBWD1-220ENST00000612045 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
CBWD1-220ENST00000612045 CCDC152Q4G0S7 254 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 NYXQ9GZU5 481 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 MAP4K4O95819 1239 aaPredicted RBP15.03■□□□□ -0
CBWD1-220ENST00000612045 LDHAL6AQ6ZMR3 332 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 CEP126Q9P2H0 1117 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 RIPOR2Q9Y4F9 1068 aa15.03■□□□□ -0
CBWD1-220ENST00000612045 GTF2E1P29083 439 aaPredicted RBP15.02■□□□□ -0
CBWD1-220ENST00000612045 NBPF5PQ86XG9 351 aaPredicted RBP15.02■□□□□ -0
CBWD1-220ENST00000612045 CNTROBQ8N137 903 aa15.02■□□□□ -0
CBWD1-220ENST00000612045 C22orf23Q9BZE7 217 aa15.02■□□□□ -0
CBWD1-220ENST00000612045 RTL9Q8NET4 1388 aa15.02□□□□□ -0.01
CBWD1-220ENST00000612045 SLC10A5Q5PT55 438 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 CNNM1Q9NRU3 951 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 TNS1Q9HBL0 1735 aaKnown RBP15.01□□□□□ -0.01
CBWD1-220ENST00000612045 ZNF609O15014 1411 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 TIMM10P62072 90 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
CBWD1-220ENST00000612045 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
CBWD1-220ENST00000612045 RIC1Q4ADV7 1423 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 ATP5JP18859 108 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 CHMLP26374 656 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 NFIXQ14938 502 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 SF3B3Q15393 1217 aaKnown RBP15□□□□□ -0.01
CBWD1-220ENST00000612045 METTL24Q5JXM2 366 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 SEC31BQ9NQW1 1179 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 AKAP2Q9Y2D5 859 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 LRP5O75197 1615 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 AK9Q5TCS8 1911 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 ABCC12Q96J65 1359 aa15□□□□□ -0.01
CBWD1-220ENST00000612045 A0A1B0GUL7 405 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 GYS1P13807 737 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 ILDR1Q86SU0 546 aaPredicted RBP14.99□□□□□ -0.01
CBWD1-220ENST00000612045 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 BOLA2Q9H3K6 86 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
CBWD1-220ENST00000612045 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
CBWD1-220ENST00000612045 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
CBWD1-220ENST00000612045 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
CBWD1-220ENST00000612045 POTEHQ6S545 545 aa14.98□□□□□ -0.01
CBWD1-220ENST00000612045 VGLL2Q8N8G2 317 aa14.98□□□□□ -0.01
CBWD1-220ENST00000612045 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
CBWD1-220ENST00000612045 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
CBWD1-220ENST00000612045 NLRP3Q96P20 1036 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms