RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
RTN1-209ENST00000611068 ZBTB1Q9Y2K1 713 aa19.17■□□□□ 0.66
RTN1-209ENST00000611068 STARD3NLO95772 234 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 GPTP24298 496 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
RTN1-209ENST00000611068 C17orf53Q8N3J3 647 aaPredicted RBP19.16■□□□□ 0.66
RTN1-209ENST00000611068 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
RTN1-209ENST00000611068 TNS2Q63HR2 1409 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 SLIT2O94813 1529 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
RTN1-209ENST00000611068 BCL9LQ86UU0 1499 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 ITGB4P16144 1822 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 RILPL2Q969X0 211 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 MX1P20591 662 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
RTN1-209ENST00000611068 TRIM6-TRIM34B2RNG4 842 aa19.14■□□□□ 0.65
RTN1-209ENST00000611068 ATP6V1AP38606 617 aa19.14■□□□□ 0.65
RTN1-209ENST00000611068 HLFQ16534 295 aa19.14■□□□□ 0.65
RTN1-209ENST00000611068 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
RTN1-209ENST00000611068 CYP19A1P11511 503 aaPredicted RBP19.14■□□□□ 0.65
RTN1-209ENST00000611068 LRP6O75581 1613 aa19.14■□□□□ 0.65
RTN1-209ENST00000611068 CDCA7Q9BWT1 371 aaPredicted RBP19.13■□□□□ 0.65
RTN1-209ENST00000611068 NRAPQ86VF7 1730 aa19.13■□□□□ 0.65
RTN1-209ENST00000611068 PTMAP06454 111 aaKnown RBP19.13■□□□□ 0.65
RTN1-209ENST00000611068 RNF214Q8ND24 703 aa19.13■□□□□ 0.65
RTN1-209ENST00000611068 UBR2Q8IWV8 1755 aa19.12■□□□□ 0.65
RTN1-209ENST00000611068 BARGINQ6ZT62 677 aa19.12■□□□□ 0.65
RTN1-209ENST00000611068 DNAJC2Q99543 621 aaKnown RBP19.12■□□□□ 0.65
RTN1-209ENST00000611068 CAPN2P17655 700 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 LMBR1LQ6UX01 489 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 CDC45O75419 566 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 SLC20A2Q08357 652 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 VPS72Q15906 364 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 CLEC17AQ6ZS10 378 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 KIF1BPQ96EK5 621 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 CWC25Q9NXE8 425 aaPredicted RBP19.11■□□□□ 0.65
RTN1-209ENST00000611068 UTYO14607 1347 aa19.11■□□□□ 0.65
RTN1-209ENST00000611068 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
RTN1-209ENST00000611068 KIF6Q6ZMV9 814 aa19.1■□□□□ 0.65
RTN1-209ENST00000611068 DHX37Q8IY37 1157 aaKnown RBP19.1■□□□□ 0.65
RTN1-209ENST00000611068 CCDC8Q9H0W5 538 aaPredicted RBP19.1■□□□□ 0.65
RTN1-209ENST00000611068 SLFN14P0C7P3 912 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 G3BP1Q13283 466 aaKnown RBP eCLIP19.09■□□□□ 0.65
RTN1-209ENST00000611068 ITPK1Q13572 414 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
RTN1-209ENST00000611068 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 PAPPAQ13219 1627 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 LOC102724428A0A0B4J2F2 783 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 SASH1O94885 1247 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 SIK1P57059 783 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 MTX1Q13505 466 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
RTN1-209ENST00000611068 KIF2CQ99661 725 aa19.09■□□□□ 0.65
RTN1-209ENST00000611068 TEX13AQ9BXU3 409 aaPredicted RBP19.09■□□□□ 0.65
RTN1-209ENST00000611068 RAB11FIP3O75154 756 aa19.08■□□□□ 0.65
RTN1-209ENST00000611068 ZNF594Q96JF6 807 aaPredicted RBP19.08■□□□□ 0.65
RTN1-209ENST00000611068 SYCE3A1L190 88 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 AACSQ86V21 672 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 TLR7Q9NYK1 1049 aaKnown RBP19.08■□□□□ 0.64
RTN1-209ENST00000611068 AFF2P51816 1311 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 SALL3Q9BXA9 1300 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 LAMB4A4D0S4 1761 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 ARFGEF2Q9Y6D5 1785 aa19.08■□□□□ 0.64
RTN1-209ENST00000611068 GPT2Q8TD30 523 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 CASP7P55210 303 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 PIBF1Q8WXW3 757 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 ANKRD7Q92527 254 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 TRIM34Q9BYJ4 488 aa19.07■□□□□ 0.64
RTN1-209ENST00000611068 CRKLP46109 303 aaKnown RBP19.06■□□□□ 0.64
RTN1-209ENST00000611068 TCIRG1Q13488 830 aa19.06■□□□□ 0.64
RTN1-209ENST00000611068 AFDNP55196 1824 aaKnown RBP19.06■□□□□ 0.64
RTN1-209ENST00000611068 K7ELQ4 463 aaPredicted RBP19.06■□□□□ 0.64
RTN1-209ENST00000611068 DZIP3Q86Y13 1208 aaKnown RBP19.06■□□□□ 0.64
RTN1-209ENST00000611068 CLASRPQ8N2M8 674 aaKnown RBP19.06■□□□□ 0.64
RTN1-209ENST00000611068 HDAC5Q9UQL6 1122 aa19.06■□□□□ 0.64
RTN1-209ENST00000611068 H7C1W4 665 aa19.05■□□□□ 0.64
RTN1-209ENST00000611068 FOXO4P98177 505 aa19.05■□□□□ 0.64
RTN1-209ENST00000611068 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
RTN1-209ENST00000611068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
RTN1-209ENST00000611068 IFIT2P09913 472 aaKnown RBP19.05■□□□□ 0.64
RTN1-209ENST00000611068 EAF2Q96CJ1 260 aaPredicted RBP19.05■□□□□ 0.64
RTN1-209ENST00000611068 TIGD1Q96MW7 591 aa19.05■□□□□ 0.64
RTN1-209ENST00000611068 SPATA31A6Q5VVP1 1343 aa19.05■□□□□ 0.64
RTN1-209ENST00000611068 HSP90AB4PQ58FF6 505 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 INTS5Q6P9B9 1019 aaKnown RBP19.04■□□□□ 0.64
RTN1-209ENST00000611068 LRSAM1Q6UWE0 723 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 OGFRQ9NZT2 677 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 TMEM63CQ9P1W3 806 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 PTPN12Q05209 780 aaKnown RBP19.04■□□□□ 0.64
RTN1-209ENST00000611068 OSBPL3Q9H4L5 887 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 MAP3K15Q6ZN16 1313 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 TFCP2Q12800 502 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 PKP1Q13835 747 aa19.04■□□□□ 0.64
RTN1-209ENST00000611068 CCDC191Q8NCU4 936 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms