RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 MPNDQ8N594 471 aa13.32□□□□□ -0.28
RN7SL539P-201ENST00000610974 HHIPL1Q96JK4 782 aa13.32□□□□□ -0.28
RN7SL539P-201ENST00000610974 AOC2O75106 756 aa13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 RAD17O75943 681 aa13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 CELF2O95319 508 aaKnown RBP13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 RIPK4P57078 832 aa13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 TNIP1Q15025 636 aa13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 GLIS2Q9BZE0 524 aaPredicted RBP13.31□□□□□ -0.28
RN7SL539P-201ENST00000610974 CA12O43570 354 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 TCIRG1Q13488 830 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 GRAPQ13588 217 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 GRAPLQ8TC17 118 aaPredicted RBP13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 TRMT112Q9UI30 125 aaKnown RBP13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 SH3TC1Q8TE82 1336 aa13.3□□□□□ -0.28
RN7SL539P-201ENST00000610974 TAF1P21675 1872 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 LRRC37AA6NMS7 1700 aa13.29□□□□□ -0.28
RN7SL539P-201ENST00000610974 DUOX1Q9NRD9 1551 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 CCDC85CA6NKD9 419 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 H7C1D1 291 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 ZNF408Q9H9D4 720 aa13.28□□□□□ -0.28
RN7SL539P-201ENST00000610974 RGS19P49795 217 aa13.27□□□□□ -0.29
RN7SL539P-201ENST00000610974 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.29
RN7SL539P-201ENST00000610974 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
RN7SL539P-201ENST00000610974 MLLT1Q03111 559 aaPredicted RBP13.26□□□□□ -0.29
RN7SL539P-201ENST00000610974 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
RN7SL539P-201ENST00000610974 DPF2Q92785 391 aa13.26□□□□□ -0.29
RN7SL539P-201ENST00000610974 CHL1O00533 1208 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 NOGQ13253 232 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 USP48Q86UV5 1035 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
RN7SL539P-201ENST00000610974 PSMD14O00487 310 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 DBNDD1Q9H9R9 158 aa13.24□□□□□ -0.29
RN7SL539P-201ENST00000610974 SLC34A2O95436 690 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 HUNKP57058 714 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 RALBP1Q15311 655 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 FAM89AQ96GI7 184 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 MCOLN1Q9GZU1 580 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
RN7SL539P-201ENST00000610974 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 C6orf229H3BNL8 230 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 HOXB7P09629 217 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 TBC1D10BQ4KMP7 808 aaPredicted RBP13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 KRT26Q7Z3Y9 468 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 ZIC5Q96T25 663 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
RN7SL539P-201ENST00000610974 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 COL4A1P02462 1669 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 ECE2O60344 883 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 EGFRP00533 1210 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 GPSM2P81274 684 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 DGKZQ13574 1117 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 EYA3Q99504 573 aa13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
RN7SL539P-201ENST00000610974 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 FAM155AB1AL88 458 aaPredicted RBP13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
RN7SL539P-201ENST00000610974 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms