RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 FOXD4L5Q5VV16 416 aaPredicted RBP18.27■□□□□ 0.51
CNTFR-204ENST00000610543 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.51
CNTFR-204ENST00000610543 FOXD4L4Q8WXT5 416 aaPredicted RBP18.27■□□□□ 0.51
CNTFR-204ENST00000610543 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.51
CNTFR-204ENST00000610543 SMC3Q9UQE7 1217 aa18.27■□□□□ 0.51
CNTFR-204ENST00000610543 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
CNTFR-204ENST00000610543 COL22A1Q8NFW1 1626 aaPredicted RBP18.26■□□□□ 0.51
CNTFR-204ENST00000610543 SLC27A2O14975 620 aa18.26■□□□□ 0.51
CNTFR-204ENST00000610543 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
CNTFR-204ENST00000610543 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
CNTFR-204ENST00000610543 CIAO1O76071 339 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ZNF445P59923 1031 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ISCA1Q9BUE6 129 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ZNF609O15014 1411 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 PIGBQ92521 554 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
CNTFR-204ENST00000610543 ZNF330Q9Y3S2 320 aaPredicted RBP18.25■□□□□ 0.51
CNTFR-204ENST00000610543 EYA2O00167 538 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 CPA1P15085 419 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 TRIM28Q13263 835 aaKnown RBP18.24■□□□□ 0.51
CNTFR-204ENST00000610543 KRT32Q14532 448 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 SPEF2Q9C093 1822 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
CNTFR-204ENST00000610543 ZSCAN23Q3MJ62 389 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 GAS2L3Q86XJ1 694 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
CNTFR-204ENST00000610543 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
CNTFR-204ENST00000610543 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 KBTBD3Q8NAB2 608 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 EDC3Q96F86 508 aaKnown RBP18.23■□□□□ 0.51
CNTFR-204ENST00000610543 NEUROD6Q96NK8 337 aa18.23■□□□□ 0.51
CNTFR-204ENST00000610543 TAF5LO75529 589 aa18.22■□□□□ 0.51
CNTFR-204ENST00000610543 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
CNTFR-204ENST00000610543 GPT2Q8TD30 523 aa18.22■□□□□ 0.51
CNTFR-204ENST00000610543 COL16A1Q07092 1604 aaPredicted RBP18.22■□□□□ 0.51
CNTFR-204ENST00000610543 BCL9O00512 1426 aa18.22■□□□□ 0.51
CNTFR-204ENST00000610543 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
CNTFR-204ENST00000610543 STX6O43752 255 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 MCMDC2Q4G0Z9 681 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 MAP3K15Q6ZN16 1313 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 ALDH8A1Q9H2A2 487 aaPredicted RBP18.21■□□□□ 0.51
CNTFR-204ENST00000610543 PAG1Q9NWQ8 432 aa18.21■□□□□ 0.51
CNTFR-204ENST00000610543 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
CNTFR-204ENST00000610543 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
CNTFR-204ENST00000610543 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
CNTFR-204ENST00000610543 ANKRD36CQ5JPF3 1778 aa18.2■□□□□ 0.5
CNTFR-204ENST00000610543 LARGE1O95461 756 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 SYT1P21579 422 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 ZBTB38Q8NAP3 1195 aaPredicted RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 EXOC5O00471 708 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 GJB2P29033 226 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 NASPP49321 788 aaPredicted RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 LRRC24Q50LG9 513 aa18.19■□□□□ 0.5
CNTFR-204ENST00000610543 GIGYF2Q6Y7W6 1299 aaKnown RBP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
CNTFR-204ENST00000610543 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
CNTFR-204ENST00000610543 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
CNTFR-204ENST00000610543 ZNF594Q96JF6 807 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-204ENST00000610543 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
CNTFR-204ENST00000610543 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
CNTFR-204ENST00000610543 GOLIM4O00461 696 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 F13A1P00488 732 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 IFIT1P09914 478 aaKnown RBP18.17■□□□□ 0.5
CNTFR-204ENST00000610543 ME3Q16798 604 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 CHAMP1Q96JM3 812 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 TIMM10P62072 90 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
CNTFR-204ENST00000610543 CDCA7Q9BWT1 371 aaPredicted RBP18.17■□□□□ 0.5
CNTFR-204ENST00000610543 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
CNTFR-204ENST00000610543 DOT1LQ8TEK3 1739 aa18.16■□□□□ 0.5
CNTFR-204ENST00000610543 PHF14O94880 888 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms