RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CASP7P55210 303 aa16.28■□□□□ 0.2
CD9-212ENST00000610354 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
CD9-212ENST00000610354 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
CD9-212ENST00000610354 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
CD9-212ENST00000610354 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
CD9-212ENST00000610354 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
CD9-212ENST00000610354 NEXNQ0ZGT2 675 aa16.27■□□□□ 0.2
CD9-212ENST00000610354 GRAPQ13588 217 aa16.27■□□□□ 0.2
CD9-212ENST00000610354 GCKRQ14397 625 aa16.27■□□□□ 0.2
CD9-212ENST00000610354 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
CD9-212ENST00000610354 LINS1Q8NG48 757 aa16.27■□□□□ 0.2
CD9-212ENST00000610354 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
CD9-212ENST00000610354 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
CD9-212ENST00000610354 MYH3P11055 1940 aa16.27■□□□□ 0.2
CD9-212ENST00000610354 PDE8AO60658 829 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 BBOX1O75936 387 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
CD9-212ENST00000610354 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
CD9-212ENST00000610354 COL4A5P29400 1685 aa16.25■□□□□ 0.19
CD9-212ENST00000610354 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
CD9-212ENST00000610354 GPBP1L1Q9HC44 474 aaPredicted RBP16.25■□□□□ 0.19
CD9-212ENST00000610354 LRRC37AA6NMS7 1700 aa16.25■□□□□ 0.19
CD9-212ENST00000610354 KIF3CO14782 793 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 DSG3P32926 999 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
CD9-212ENST00000610354 PSMD1Q99460 953 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 NMRK2Q9NPI5 230 aa16.24■□□□□ 0.19
CD9-212ENST00000610354 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
CD9-212ENST00000610354 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
CD9-212ENST00000610354 DUOX1Q9NRD9 1551 aa16.23■□□□□ 0.19
CD9-212ENST00000610354 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
CD9-212ENST00000610354 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
CD9-212ENST00000610354 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
CD9-212ENST00000610354 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
CD9-212ENST00000610354 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.19
CD9-212ENST00000610354 CTSWP56202 376 aa16.21■□□□□ 0.19
CD9-212ENST00000610354 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
CD9-212ENST00000610354 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.19
CD9-212ENST00000610354 RTFDC1Q9BY42 306 aaPredicted RBP16.21■□□□□ 0.19
CD9-212ENST00000610354 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
CD9-212ENST00000610354 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
CD9-212ENST00000610354 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
CD9-212ENST00000610354 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 GRIPAP1Q4V328 841 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 GREM2Q9H772 168 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 SMC4Q9NTJ3 1288 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 PTPRCP08575 1304 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
CD9-212ENST00000610354 POTECB2RU33 542 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 CSF1RP07333 972 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 FOXO4P98177 505 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 EPHA10Q5JZY3 1008 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 MPNDQ8N594 471 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 SRCIN1Q9C0H9 1055 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 FZD9O00144 591 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
CD9-212ENST00000610354 GPSM2P81274 684 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
CD9-212ENST00000610354 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
CD9-212ENST00000610354 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
CD9-212ENST00000610354 GRM8O00222 908 aa16.18■□□□□ 0.18
CD9-212ENST00000610354 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
CD9-212ENST00000610354 AOC3Q16853 763 aa16.18■□□□□ 0.18
CD9-212ENST00000610354 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
CD9-212ENST00000610354 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
CD9-212ENST00000610354 C1QTNF8P60827 252 aa16.17■□□□□ 0.18
CD9-212ENST00000610354 POLLQ9UGP5 575 aa16.17■□□□□ 0.18
CD9-212ENST00000610354 UTYO14607 1347 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
CD9-212ENST00000610354 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 SUCLG2Q96I99 432 aa16.16■□□□□ 0.18
CD9-212ENST00000610354 GPR101Q96P66 508 aaPredicted RBP16.16■□□□□ 0.18
CD9-212ENST00000610354 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
CD9-212ENST00000610354 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
CD9-212ENST00000610354 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
CD9-212ENST00000610354 BCAR3O75815 825 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 ITGA6P23229 1130 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 DPY19L2Q6NUT2 758 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
CD9-212ENST00000610354 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
CD9-212ENST00000610354 CAPN15O75808 1086 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms