RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 BTLAQ7Z6A9 289 aa8.06□□□□□ -1.12
SMCHD1-213ENST00000609587 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-213ENST00000609587 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 FSTP19883 344 aa8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 SSTR4P31391 388 aa8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 PLAURQ03405 335 aa8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 RBM19Q9Y4C8 960 aaKnown RBP8.05□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L21D6R901 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 COBLO75128 1261 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 NFKB1P19838 968 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 SEC13P55735 322 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 GSX2Q9BZM3 304 aa8.04□□□□□ -1.12
SMCHD1-213ENST00000609587 DEAF1O75398 565 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 TXKP42681 527 aa8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 EFCC1Q9HA90 598 aa8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-213ENST00000609587 ARID1BQ8NFD5 2236 aaPredicted RBP8.02□□□□□ -1.13
SMCHD1-213ENST00000609587 ANKMY2Q8IV38 441 aa8.02□□□□□ -1.13
SMCHD1-213ENST00000609587 CPB1P15086 417 aa8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 GRNP28799 593 aaKnown RBP8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 DPYDQ12882 1025 aa8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 TSEN2Q8NCE0 465 aaKnown RBP8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 CHMP3Q9Y3E7 222 aa8.01□□□□□ -1.13
SMCHD1-213ENST00000609587 C21orf2O43822 256 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 ELOAQ14241 798 aaKnown RBP8□□□□□ -1.13
SMCHD1-213ENST00000609587 PERM1Q5SV97 790 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 ALDH16A1Q8IZ83 802 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 PNMA5Q96PV4 448 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 FRRS1LQ9P0K9 344 aa8□□□□□ -1.13
SMCHD1-213ENST00000609587 OAS3Q9Y6K5 1087 aaKnown RBP8□□□□□ -1.13
SMCHD1-213ENST00000609587 KIAA1324LA8MWY0 1029 aaPredicted RBP7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 DLL1O00548 723 aa7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 MED26O95402 600 aa7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 IRAK1P51617 712 aa7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 CCINQ13939 588 aa7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
SMCHD1-213ENST00000609587 PPP1R12BO60237 982 aaPredicted RBP7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 ATG7O95352 703 aa7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 PDIA4P13667 645 aaKnown RBP7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 IER5Q5VY09 327 aa7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 GAS2L2Q8NHY3 880 aa7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
SMCHD1-213ENST00000609587 STAG2Q8N3U4 1231 aa7.97□□□□□ -1.13
SMCHD1-213ENST00000609587 AKTIPQ9H8T0 292 aa7.97□□□□□ -1.13
SMCHD1-213ENST00000609587 ZFATQ9P243 1243 aa7.97□□□□□ -1.13
SMCHD1-213ENST00000609587 NOVA2Q9UNW9 492 aaKnown RBP7.97□□□□□ -1.13
SMCHD1-213ENST00000609587 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 ALX3O95076 343 aa7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 MAP3K6O95382 1288 aa7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 C2orf49Q9BVC5 232 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 BCS1LQ9Y276 419 aa7.96□□□□□ -1.14
SMCHD1-213ENST00000609587 TGFBR3LH3BV60 316 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 MLLT1Q03111 559 aaPredicted RBP7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 PDE4CQ08493 712 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 HIF1AQ16665 826 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 Q6ZS46 218 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 TRPM4Q8TD43 1214 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 NGLY1Q96IV0 654 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 HINFPQ9BQA5 517 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 ZMIZ1Q9ULJ6 1067 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 ATAD2Q6PL18 1390 aa7.95□□□□□ -1.14
SMCHD1-213ENST00000609587 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 TGFB1P01137 390 aa7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 PCSK7Q16549 785 aa7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 ELMSAN1Q6PJG2 1045 aa7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 DHX32Q7L7V1 743 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 SCG3Q8WXD2 468 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 TTC9Q92623 222 aa7.94□□□□□ -1.14
SMCHD1-213ENST00000609587 ADAMTS4O75173 837 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 IGFBP4P22692 258 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 WEE1P30291 646 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 GPLD1P80108 840 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 SWI5Q1ZZU3 235 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 KRT25Q7Z3Z0 450 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 TRAIPQ9BWF2 469 aa7.93□□□□□ -1.14
SMCHD1-213ENST00000609587 USTQ9Y2C2 406 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms