RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 TMEM57Q8N5G2 664 aa15.44■□□□□ 0.06
LINC00963-212ENST00000608669 API5Q9BZZ5 524 aaKnown RBP15.44■□□□□ 0.06
LINC00963-212ENST00000608669 GREM2Q9H772 168 aa15.44■□□□□ 0.06
LINC00963-212ENST00000608669 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
LINC00963-212ENST00000608669 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
LINC00963-212ENST00000608669 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
LINC00963-212ENST00000608669 PPEF1O14829 653 aaPredicted RBP15.43■□□□□ 0.06
LINC00963-212ENST00000608669 PDE8AO60658 829 aa15.43■□□□□ 0.06
LINC00963-212ENST00000608669 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
LINC00963-212ENST00000608669 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
LINC00963-212ENST00000608669 MEIS3Q99687 375 aa15.43■□□□□ 0.06
LINC00963-212ENST00000608669 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
LINC00963-212ENST00000608669 ALDH1L1O75891 902 aa15.42■□□□□ 0.06
LINC00963-212ENST00000608669 PRELPP51888 382 aa15.42■□□□□ 0.06
LINC00963-212ENST00000608669 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
LINC00963-212ENST00000608669 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
LINC00963-212ENST00000608669 KAZALD1Q96I82 304 aa15.42■□□□□ 0.06
LINC00963-212ENST00000608669 LRRC37AA6NMS7 1700 aa15.41■□□□□ 0.06
LINC00963-212ENST00000608669 FOXO4P98177 505 aa15.41■□□□□ 0.06
LINC00963-212ENST00000608669 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
LINC00963-212ENST00000608669 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
LINC00963-212ENST00000608669 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
LINC00963-212ENST00000608669 GPR101Q96P66 508 aaPredicted RBP15.41■□□□□ 0.06
LINC00963-212ENST00000608669 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
LINC00963-212ENST00000608669 C1orf115Q9H7X2 142 aa15.41■□□□□ 0.06
LINC00963-212ENST00000608669 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
LINC00963-212ENST00000608669 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
LINC00963-212ENST00000608669 NFKBIEO00221 500 aa15.4■□□□□ 0.06
LINC00963-212ENST00000608669 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
LINC00963-212ENST00000608669 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
LINC00963-212ENST00000608669 BICC1Q9H694 974 aaKnown RBP15.4■□□□□ 0.06
LINC00963-212ENST00000608669 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 IPO8O15397 1037 aaKnown RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 GRAPQ13588 217 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 SF3B3Q15393 1217 aaKnown RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 CCDC152Q4G0S7 254 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 DZIP1LQ8IYY4 767 aaKnown RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
LINC00963-212ENST00000608669 SBF1O95248 1867 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 CHD4Q14839 1912 aa15.39■□□□□ 0.05
LINC00963-212ENST00000608669 DUOX1Q9NRD9 1551 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
LINC00963-212ENST00000608669 ANKRD44Q8N8A2 993 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 KLHDC4Q8TBB5 520 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 COL4A5P29400 1685 aa15.38■□□□□ 0.05
LINC00963-212ENST00000608669 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
LINC00963-212ENST00000608669 ITGA6P23229 1130 aa15.37■□□□□ 0.05
LINC00963-212ENST00000608669 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
LINC00963-212ENST00000608669 INTS3Q68E01 1043 aaKnown RBP15.37■□□□□ 0.05
LINC00963-212ENST00000608669 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-212ENST00000608669 PDZRN3Q9UPQ7 1066 aa15.37■□□□□ 0.05
LINC00963-212ENST00000608669 COG6Q9Y2V7 657 aa15.37■□□□□ 0.05
LINC00963-212ENST00000608669 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
LINC00963-212ENST00000608669 UBTFL1P0CB47 393 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-212ENST00000608669 CCDC93Q567U6 631 aa15.36■□□□□ 0.05
LINC00963-212ENST00000608669 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
LINC00963-212ENST00000608669 LTBP1Q14766 1721 aa15.36■□□□□ 0.05
LINC00963-212ENST00000608669 UTYO14607 1347 aa15.36■□□□□ 0.05
LINC00963-212ENST00000608669 GPSM2P81274 684 aa15.35■□□□□ 0.05
LINC00963-212ENST00000608669 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
LINC00963-212ENST00000608669 RNF181Q9P0P0 153 aa15.35■□□□□ 0.05
LINC00963-212ENST00000608669 SNAP23O00161 211 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 CSF1RP07333 972 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 RPS8P62241 208 aaKnown RBP15.34■□□□□ 0.05
LINC00963-212ENST00000608669 C9orf131Q5VYM1 1079 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
LINC00963-212ENST00000608669 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
LINC00963-212ENST00000608669 RRP1P56182 461 aaKnown RBP15.33■□□□□ 0.04
LINC00963-212ENST00000608669 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-212ENST00000608669 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
LINC00963-212ENST00000608669 IRX6P78412 446 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-212ENST00000608669 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
LINC00963-212ENST00000608669 SIL1Q9H173 461 aa15.32■□□□□ 0.04
LINC00963-212ENST00000608669 NSFL1CQ9UNZ2 370 aaKnown RBP15.32■□□□□ 0.04
LINC00963-212ENST00000608669 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
LINC00963-212ENST00000608669 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 TAF5LO75529 589 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 YY1P25490 414 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 KLRK1P26718 216 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 AOC3Q16853 763 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 DPP8Q6V1X1 898 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 RTL9Q8NET4 1388 aa15.31■□□□□ 0.04
LINC00963-212ENST00000608669 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
LINC00963-212ENST00000608669 BBOX1O75936 387 aa15.3■□□□□ 0.04
LINC00963-212ENST00000608669 IGHMBP2P38935 993 aaKnown RBP15.3■□□□□ 0.04
LINC00963-212ENST00000608669 MVPQ14764 893 aaKnown RBP15.3■□□□□ 0.04
LINC00963-212ENST00000608669 CCDC57Q2TAC2 916 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms