RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 PGAP2Q9UHJ9 254 aa17.74■□□□□ 0.43
CTSA-218ENST00000607814 PPIP5K2O43314 1243 aa17.73■□□□□ 0.43
CTSA-218ENST00000607814 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
CTSA-218ENST00000607814 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
CTSA-218ENST00000607814 ZNRF3Q9ULT6 936 aa17.73■□□□□ 0.43
CTSA-218ENST00000607814 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
CTSA-218ENST00000607814 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
CTSA-218ENST00000607814 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
CTSA-218ENST00000607814 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
CTSA-218ENST00000607814 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
CTSA-218ENST00000607814 PDIA6Q15084 440 aa17.71■□□□□ 0.43
CTSA-218ENST00000607814 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
CTSA-218ENST00000607814 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
CTSA-218ENST00000607814 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
CTSA-218ENST00000607814 CXCL9Q07325 125 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 NOGQ13253 232 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 AOC3Q16853 763 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 SUSD4Q5VX71 490 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 CASP8AP2Q9UKL3 1982 aa17.7■□□□□ 0.42
CTSA-218ENST00000607814 NTSR2O95665 410 aa17.69■□□□□ 0.42
CTSA-218ENST00000607814 AIMP1Q12904 312 aaKnown RBP17.69■□□□□ 0.42
CTSA-218ENST00000607814 TNIP1Q15025 636 aa17.69■□□□□ 0.42
CTSA-218ENST00000607814 GIGYF2Q6Y7W6 1299 aaKnown RBP17.69■□□□□ 0.42
CTSA-218ENST00000607814 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
CTSA-218ENST00000607814 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CTSA-218ENST00000607814 GPTP24298 496 aa17.68■□□□□ 0.42
CTSA-218ENST00000607814 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
CTSA-218ENST00000607814 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
CTSA-218ENST00000607814 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
CTSA-218ENST00000607814 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
CTSA-218ENST00000607814 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
CTSA-218ENST00000607814 BBOX1O75936 387 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 ZNF853P0CG23 659 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 DGKZQ13574 1117 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
CTSA-218ENST00000607814 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
CTSA-218ENST00000607814 COPS6Q7L5N1 327 aa17.66■□□□□ 0.42
CTSA-218ENST00000607814 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
CTSA-218ENST00000607814 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
CTSA-218ENST00000607814 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
CTSA-218ENST00000607814 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
CTSA-218ENST00000607814 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 DPP8Q6V1X1 898 aaPredicted RBP17.65■□□□□ 0.42
CTSA-218ENST00000607814 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 IFT57Q9NWB7 429 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 SAGE1Q9NXZ1 904 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 ABCC4O15439 1325 aa17.65■□□□□ 0.42
CTSA-218ENST00000607814 HIRAP54198 1017 aaPredicted RBP17.64■□□□□ 0.41
CTSA-218ENST00000607814 GNAI1P63096 354 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 MPNDQ8N594 471 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
CTSA-218ENST00000607814 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
CTSA-218ENST00000607814 H7C1D1 291 aa17.63■□□□□ 0.41
CTSA-218ENST00000607814 TSPYL6Q8N831 410 aa17.63■□□□□ 0.41
CTSA-218ENST00000607814 CNOT7Q9UIV1 285 aaKnown RBP17.63■□□□□ 0.41
CTSA-218ENST00000607814 RAD17O75943 681 aa17.62■□□□□ 0.41
CTSA-218ENST00000607814 HUNKP57058 714 aa17.62■□□□□ 0.41
CTSA-218ENST00000607814 TMC4Q7Z404 712 aa17.62■□□□□ 0.41
CTSA-218ENST00000607814 DPF2Q92785 391 aa17.62■□□□□ 0.41
CTSA-218ENST00000607814 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
CTSA-218ENST00000607814 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
CTSA-218ENST00000607814 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
CTSA-218ENST00000607814 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
CTSA-218ENST00000607814 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
CTSA-218ENST00000607814 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
CTSA-218ENST00000607814 DDX46Q7L014 1031 aaKnown RBP17.59■□□□□ 0.41
CTSA-218ENST00000607814 USP48Q86UV5 1035 aa17.59■□□□□ 0.41
CTSA-218ENST00000607814 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
CTSA-218ENST00000607814 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
CTSA-218ENST00000607814 FAM155AB1AL88 458 aaPredicted RBP17.58■□□□□ 0.4
CTSA-218ENST00000607814 GRAPQ13588 217 aa17.58■□□□□ 0.4
CTSA-218ENST00000607814 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
CTSA-218ENST00000607814 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
CTSA-218ENST00000607814 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.4
CTSA-218ENST00000607814 ZIC5Q96T25 663 aa17.58■□□□□ 0.4
CTSA-218ENST00000607814 GBA2Q9HCG7 927 aaPredicted RBP17.58■□□□□ 0.4
CTSA-218ENST00000607814 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
CTSA-218ENST00000607814 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
CTSA-218ENST00000607814 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
CTSA-218ENST00000607814 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
CTSA-218ENST00000607814 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
CTSA-218ENST00000607814 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
CTSA-218ENST00000607814 HOXB7P09629 217 aa17.56■□□□□ 0.4
CTSA-218ENST00000607814 LAMB2P55268 1798 aa17.56■□□□□ 0.4
CTSA-218ENST00000607814 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
CTSA-218ENST00000607814 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
CTSA-218ENST00000607814 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
CTSA-218ENST00000607814 DCPSQ96C86 337 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms