RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 GJA3Q9Y6H8 435 aa24.59■■□□□ 1.53
CTSA-217ENST00000607482 EXOSC9Q06265 439 aaKnown RBP24.58■■□□□ 1.53
CTSA-217ENST00000607482 ZNF541Q9H0D2 1346 aa24.58■■□□□ 1.52
CTSA-217ENST00000607482 FKBP5Q13451 457 aaPredicted RBP24.57■■□□□ 1.52
CTSA-217ENST00000607482 SF3B3Q15393 1217 aaKnown RBP24.57■■□□□ 1.52
CTSA-217ENST00000607482 FZD9O00144 591 aa24.56■■□□□ 1.52
CTSA-217ENST00000607482 GPC2Q8N158 579 aa24.56■■□□□ 1.52
CTSA-217ENST00000607482 CEP350Q5VT06 3117 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 PCCAP05165 728 aaPredicted RBP24.55■■□□□ 1.52
CTSA-217ENST00000607482 LMOD1P29536 600 aaPredicted RBP24.55■■□□□ 1.52
CTSA-217ENST00000607482 AOC3Q16853 763 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 CCDC152Q4G0S7 254 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 EAPPQ56P03 285 aaPredicted RBP24.55■■□□□ 1.52
CTSA-217ENST00000607482 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
CTSA-217ENST00000607482 VPS33BQ9H267 617 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 HACL1Q9UJ83 578 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 CLEC11AQ9Y240 323 aa24.55■■□□□ 1.52
CTSA-217ENST00000607482 POTECB2RU33 542 aa24.54■■□□□ 1.52
CTSA-217ENST00000607482 L3MBTL3Q96JM7 780 aaPredicted RBP24.54■■□□□ 1.52
CTSA-217ENST00000607482 NSFL1CQ9UNZ2 370 aaKnown RBP24.54■■□□□ 1.52
CTSA-217ENST00000607482 WDR90Q96KV7 1748 aa24.54■■□□□ 1.52
CTSA-217ENST00000607482 PDE8AO60658 829 aa24.53■■□□□ 1.52
CTSA-217ENST00000607482 FLIIQ13045 1269 aa24.53■■□□□ 1.52
CTSA-217ENST00000607482 G2E3Q7L622 706 aa24.53■■□□□ 1.52
CTSA-217ENST00000607482 SLC51AQ86UW1 340 aa24.53■■□□□ 1.52
CTSA-217ENST00000607482 VAMP4O75379 141 aa24.52■■□□□ 1.52
CTSA-217ENST00000607482 RPS8P62241 208 aaKnown RBP24.52■■□□□ 1.52
CTSA-217ENST00000607482 CHADLQ6NUI6 762 aa24.52■■□□□ 1.52
CTSA-217ENST00000607482 CELF1Q92879 486 aaKnown RBP24.52■■□□□ 1.52
CTSA-217ENST00000607482 CCDC85AQ96PX6 553 aaPredicted RBP24.52■■□□□ 1.52
CTSA-217ENST00000607482 C6orf229H3BNL8 230 aa24.51■■□□□ 1.51
CTSA-217ENST00000607482 TAF1DQ9H5J8 278 aaPredicted RBP24.51■■□□□ 1.51
CTSA-217ENST00000607482 LAMB2P55268 1798 aa24.51■■□□□ 1.51
CTSA-217ENST00000607482 EPHX2P34913 555 aa24.5■■□□□ 1.51
CTSA-217ENST00000607482 PNMA8AQ86V59 439 aaPredicted RBP24.5■■□□□ 1.51
CTSA-217ENST00000607482 RTFDC1Q9BY42 306 aaPredicted RBP24.5■■□□□ 1.51
CTSA-217ENST00000607482 ZNRF3Q9ULT6 936 aa24.5■■□□□ 1.51
CTSA-217ENST00000607482 SNED1Q8TER0 1413 aa24.5■■□□□ 1.51
CTSA-217ENST00000607482 CWF19L2Q2TBE0 894 aaKnown RBP24.49■■□□□ 1.51
CTSA-217ENST00000607482 LDHDQ86WU2 507 aa24.49■■□□□ 1.51
CTSA-217ENST00000607482 ANKIB1Q9P2G1 1089 aa24.49■■□□□ 1.51
CTSA-217ENST00000607482 NEURL1BA8MQ27 555 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 G3V3G9 751 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 WASHC4Q2M389 1173 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 DCAF8Q5TAQ9 597 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 DDX60Q8IY21 1712 aaKnown RBP24.48■■□□□ 1.51
CTSA-217ENST00000607482 DNAAF4Q8WXU2 420 aa24.48■■□□□ 1.51
CTSA-217ENST00000607482 SPINK5Q9NQ38 1064 aaPredicted RBP24.48■■□□□ 1.51
CTSA-217ENST00000607482 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
CTSA-217ENST00000607482 ANKRD18AQ8IVF6 992 aa24.47■■□□□ 1.51
CTSA-217ENST00000607482 EYA3Q99504 573 aa24.47■■□□□ 1.51
CTSA-217ENST00000607482 SEC31BQ9NQW1 1179 aa24.47■■□□□ 1.51
CTSA-217ENST00000607482 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
CTSA-217ENST00000607482 RIMBP2O15034 1052 aa24.46■■□□□ 1.51
CTSA-217ENST00000607482 HTRA3P83110 453 aa24.46■■□□□ 1.51
CTSA-217ENST00000607482 TNIP1Q15025 636 aa24.46■■□□□ 1.51
CTSA-217ENST00000607482 UBE3BQ7Z3V4 1068 aa24.46■■□□□ 1.51
CTSA-217ENST00000607482 CDC5LQ99459 802 aaKnown RBP24.46■■□□□ 1.51
CTSA-217ENST00000607482 POTEIP0CG38 1075 aa24.45■■□□□ 1.5
CTSA-217ENST00000607482 POTEJP0CG39 1038 aa24.45■■□□□ 1.5
CTSA-217ENST00000607482 CTSWP56202 376 aa24.45■■□□□ 1.5
CTSA-217ENST00000607482 BCL2L13Q9BXK5 485 aa24.45■■□□□ 1.5
CTSA-217ENST00000607482 SCN4AP35499 1836 aa24.45■■□□□ 1.5
CTSA-217ENST00000607482 GPSM2P81274 684 aa24.44■■□□□ 1.5
CTSA-217ENST00000607482 LINS1Q8NG48 757 aa24.44■■□□□ 1.5
CTSA-217ENST00000607482 TAF1P21675 1872 aa24.43■■□□□ 1.5
CTSA-217ENST00000607482 RAD17O75943 681 aa24.43■■□□□ 1.5
CTSA-217ENST00000607482 GCKRQ14397 625 aa24.43■■□□□ 1.5
CTSA-217ENST00000607482 CIAPIN1Q6FI81 312 aa24.43■■□□□ 1.5
CTSA-217ENST00000607482 ZC3H12CQ9C0D7 883 aaKnown RBP24.43■■□□□ 1.5
CTSA-217ENST00000607482 E9PSI1 815 aa24.42■■□□□ 1.5
CTSA-217ENST00000607482 CXCL9Q07325 125 aa24.42■■□□□ 1.5
CTSA-217ENST00000607482 GGA1Q9UJY5 639 aa24.42■■□□□ 1.5
CTSA-217ENST00000607482 CCER2I3L3R5 266 aa24.41■■□□□ 1.5
CTSA-217ENST00000607482 UFL1O94874 794 aa24.41■■□□□ 1.5
CTSA-217ENST00000607482 COL4A5P29400 1685 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 F6X3S4 739 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 H7C1W4 665 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 SLC4A10Q6U841 1118 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 TTLL11Q8NHH1 800 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 TBC1D16Q8TBP0 767 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 POLLQ9UGP5 575 aa24.4■■□□□ 1.5
CTSA-217ENST00000607482 EPS15P42566 896 aa24.39■■□□□ 1.49
CTSA-217ENST00000607482 KLRG1Q96E93 195 aa24.39■■□□□ 1.49
CTSA-217ENST00000607482 GREM2Q9H772 168 aa24.39■■□□□ 1.49
CTSA-217ENST00000607482 DBNDD1Q9H9R9 158 aa24.39■■□□□ 1.49
CTSA-217ENST00000607482 IGHMBP2P38935 993 aaKnown RBP24.38■■□□□ 1.49
CTSA-217ENST00000607482 GMPSP49915 693 aaPredicted RBP24.38■■□□□ 1.49
CTSA-217ENST00000607482 SCNN1DP51172 638 aa24.38■■□□□ 1.49
CTSA-217ENST00000607482 DOK7Q18PE1 504 aa24.38■■□□□ 1.49
CTSA-217ENST00000607482 USP50Q70EL3 339 aaPredicted RBP24.38■■□□□ 1.49
CTSA-217ENST00000607482 DNAJC5GQ8N7S2 189 aa24.38■■□□□ 1.49
CTSA-217ENST00000607482 CACNA1FO60840 1977 aa24.37■■□□□ 1.49
CTSA-217ENST00000607482 MAP1SQ66K74 1059 aaPredicted RBP24.37■■□□□ 1.49
CTSA-217ENST00000607482 CNTROBQ8N137 903 aa24.37■■□□□ 1.49
CTSA-217ENST00000607482 MPHOSPH8Q99549 860 aa24.37■■□□□ 1.49
CTSA-217ENST00000607482 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CTSA-217ENST00000607482 GPRC5DQ9NZD1 345 aa24.37■■□□□ 1.49
CTSA-217ENST00000607482 CHMP3Q9Y3E7 222 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms