RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
PMF1-206ENST00000606952 NUTM1Q86Y26 1132 aa20.47■□□□□ 0.87
PMF1-206ENST00000606952 SLC16A10Q8TF71 515 aa20.47■□□□□ 0.87
PMF1-206ENST00000606952 EXOC6BQ9Y2D4 811 aa20.47■□□□□ 0.87
PMF1-206ENST00000606952 PRR5LQ6MZQ0 368 aa20.46■□□□□ 0.87
PMF1-206ENST00000606952 FAM177BA6PVY3 158 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 SURF6O75683 361 aaKnown RBP20.45■□□□□ 0.86
PMF1-206ENST00000606952 CIAO1O76071 339 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 SERPINB2P05120 415 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
PMF1-206ENST00000606952 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 ERC1Q8IUD2 1116 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
PMF1-206ENST00000606952 CCDC152Q4G0S7 254 aa20.44■□□□□ 0.86
PMF1-206ENST00000606952 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
PMF1-206ENST00000606952 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
PMF1-206ENST00000606952 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
PMF1-206ENST00000606952 PA2G4Q9UQ80 394 aaKnown RBP20.44■□□□□ 0.86
PMF1-206ENST00000606952 A0A1B0GUL6 1792 aa20.44■□□□□ 0.86
PMF1-206ENST00000606952 IFIT5Q13325 482 aaKnown RBP20.43■□□□□ 0.86
PMF1-206ENST00000606952 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
PMF1-206ENST00000606952 GREM2Q9H772 168 aa20.43■□□□□ 0.86
PMF1-206ENST00000606952 ANKRD18BA2A2Z9 1011 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 MSH5O43196 834 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 ITGA6P23229 1130 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 PDE4AP27815 886 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 CHMP3Q9Y3E7 222 aa20.42■□□□□ 0.86
PMF1-206ENST00000606952 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
PMF1-206ENST00000606952 EYA2O00167 538 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
PMF1-206ENST00000606952 ST5P78524 1137 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 G3BP1Q13283 466 aaKnown RBP eCLIP20.41■□□□□ 0.86
PMF1-206ENST00000606952 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 SALL3Q9BXA9 1300 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 COL4A1P02462 1669 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 SPEF2Q9C093 1822 aa20.41■□□□□ 0.86
PMF1-206ENST00000606952 SASH1O94885 1247 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 MMP10P09238 476 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 ATG9AQ7Z3C6 839 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 KLHDC4Q8TBB5 520 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 LNPKQ9C0E8 428 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 KIF13BQ9NQT8 1826 aa20.4■□□□□ 0.86
PMF1-206ENST00000606952 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
PMF1-206ENST00000606952 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
PMF1-206ENST00000606952 GPR108Q9NPR9 543 aa20.38■□□□□ 0.85
PMF1-206ENST00000606952 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
PMF1-206ENST00000606952 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
PMF1-206ENST00000606952 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
PMF1-206ENST00000606952 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
PMF1-206ENST00000606952 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
PMF1-206ENST00000606952 TAF1P21675 1872 aa20.37■□□□□ 0.85
PMF1-206ENST00000606952 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 LRRC37AA6NMS7 1700 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
PMF1-206ENST00000606952 CDC5LQ99459 802 aaKnown RBP20.36■□□□□ 0.85
PMF1-206ENST00000606952 BRIP1Q9BX63 1249 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 SIL1Q9H173 461 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
PMF1-206ENST00000606952 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
PMF1-206ENST00000606952 LRRC24Q50LG9 513 aa20.35■□□□□ 0.85
PMF1-206ENST00000606952 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
PMF1-206ENST00000606952 PLEKHM2Q8IWE5 1019 aa20.35■□□□□ 0.85
PMF1-206ENST00000606952 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
PMF1-206ENST00000606952 PDGFDQ9GZP0 370 aaPredicted RBP20.35■□□□□ 0.85
PMF1-206ENST00000606952 SEC31BQ9NQW1 1179 aa20.35■□□□□ 0.85
PMF1-206ENST00000606952 ZNF609O15014 1411 aa20.35■□□□□ 0.85
PMF1-206ENST00000606952 AOX1Q06278 1338 aa20.34■□□□□ 0.85
PMF1-206ENST00000606952 NPHP1O15259 732 aa20.34■□□□□ 0.85
PMF1-206ENST00000606952 HOXA10P31260 410 aaPredicted RBP20.34■□□□□ 0.85
PMF1-206ENST00000606952 R3HDM1Q15032 1099 aaKnown RBP20.34■□□□□ 0.85
PMF1-206ENST00000606952 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
PMF1-206ENST00000606952 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
PMF1-206ENST00000606952 PUS3Q9BZE2 481 aaKnown RBP20.34■□□□□ 0.85
PMF1-206ENST00000606952 STAP2Q9UGK3 403 aa20.34■□□□□ 0.85
PMF1-206ENST00000606952 MROH5Q6ZUA9 1318 aa20.33■□□□□ 0.85
PMF1-206ENST00000606952 APBB1O00213 710 aa20.33■□□□□ 0.85
PMF1-206ENST00000606952 IGHMBP2P38935 993 aaKnown RBP20.33■□□□□ 0.85
PMF1-206ENST00000606952 LDHAL6AQ6ZMR3 332 aa20.33■□□□□ 0.85
PMF1-206ENST00000606952 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
PMF1-206ENST00000606952 RGS3P49796 1198 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 TFCP2Q12800 502 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 TNNI3KQ59H18 835 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 IL1RAPL2Q9NP60 686 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 BSDC1Q9NW68 430 aaPredicted RBP20.32■□□□□ 0.84
PMF1-206ENST00000606952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.32■□□□□ 0.84
PMF1-206ENST00000606952 FPGT-TNNI3KV9GXZ4 949 aa20.32■□□□□ 0.84
PMF1-206ENST00000606952 SOCS7O14512 581 aa20.31■□□□□ 0.84
PMF1-206ENST00000606952 GRAPQ13588 217 aa20.31■□□□□ 0.84
PMF1-206ENST00000606952 DDX46Q7L014 1031 aaKnown RBP20.31■□□□□ 0.84
PMF1-206ENST00000606952 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
PMF1-206ENST00000606952 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
PMF1-206ENST00000606952 PELP1Q8IZL8 1130 aaKnown RBP20.31■□□□□ 0.84
PMF1-206ENST00000606952 GRAPLQ8TC17 118 aaPredicted RBP20.31■□□□□ 0.84
PMF1-206ENST00000606952 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms