RNA–Protein interactions for RNA: ENST00000606538.5

POLR2F-213, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2 BASIC

Gene POLR2F, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-213ENST00000606538 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
POLR2F-213ENST00000606538 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
POLR2F-213ENST00000606538 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
POLR2F-213ENST00000606538 NLRP3Q96P20 1036 aa16.69■□□□□ 0.26
POLR2F-213ENST00000606538 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
POLR2F-213ENST00000606538 COL4A1P02462 1669 aa16.69■□□□□ 0.26
POLR2F-213ENST00000606538 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 H0YIN7 160 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 PDE8AO60658 829 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 SF3B3Q15393 1217 aaKnown RBP16.68■□□□□ 0.26
POLR2F-213ENST00000606538 C20orf194Q5TEA3 1177 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 PLA2G12BQ9BX93 195 aa16.68■□□□□ 0.26
POLR2F-213ENST00000606538 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
POLR2F-213ENST00000606538 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
POLR2F-213ENST00000606538 FOXO4P98177 505 aa16.67■□□□□ 0.26
POLR2F-213ENST00000606538 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
POLR2F-213ENST00000606538 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
POLR2F-213ENST00000606538 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
POLR2F-213ENST00000606538 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
POLR2F-213ENST00000606538 NPR1P16066 1061 aa16.66■□□□□ 0.26
POLR2F-213ENST00000606538 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
POLR2F-213ENST00000606538 MEIS3Q99687 375 aa16.66■□□□□ 0.26
POLR2F-213ENST00000606538 CSF1RP07333 972 aa16.65■□□□□ 0.26
POLR2F-213ENST00000606538 RRP1P56182 461 aaKnown RBP16.65■□□□□ 0.26
POLR2F-213ENST00000606538 CTSWP56202 376 aa16.65■□□□□ 0.26
POLR2F-213ENST00000606538 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
POLR2F-213ENST00000606538 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
POLR2F-213ENST00000606538 PIM2Q9P1W9 311 aa16.65■□□□□ 0.26
POLR2F-213ENST00000606538 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
POLR2F-213ENST00000606538 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
POLR2F-213ENST00000606538 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
POLR2F-213ENST00000606538 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
POLR2F-213ENST00000606538 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
POLR2F-213ENST00000606538 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
POLR2F-213ENST00000606538 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.252e-14■□□□□ 10.5
POLR2F-213ENST00000606538 ZBTB7BO15156 539 aaPredicted RBP16.63■□□□□ 0.25
POLR2F-213ENST00000606538 MS4A1P11836 297 aa16.63■□□□□ 0.25
POLR2F-213ENST00000606538 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
POLR2F-213ENST00000606538 YBX3P16989 372 aaKnown RBP eCLIP16.63■□□□□ 0.253e-11■■■■□ 19.7
POLR2F-213ENST00000606538 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
POLR2F-213ENST00000606538 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
POLR2F-213ENST00000606538 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
POLR2F-213ENST00000606538 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
POLR2F-213ENST00000606538 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 MVPQ14764 893 aaKnown RBP16.62■□□□□ 0.25
POLR2F-213ENST00000606538 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
POLR2F-213ENST00000606538 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
POLR2F-213ENST00000606538 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
POLR2F-213ENST00000606538 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
POLR2F-213ENST00000606538 GREM2Q9H772 168 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
POLR2F-213ENST00000606538 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
POLR2F-213ENST00000606538 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
POLR2F-213ENST00000606538 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
POLR2F-213ENST00000606538 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
POLR2F-213ENST00000606538 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
POLR2F-213ENST00000606538 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
POLR2F-213ENST00000606538 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
POLR2F-213ENST00000606538 GRAPQ13588 217 aa16.6■□□□□ 0.25
POLR2F-213ENST00000606538 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
POLR2F-213ENST00000606538 CHRDL2Q6WN34 429 aa16.6■□□□□ 0.25
POLR2F-213ENST00000606538 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
POLR2F-213ENST00000606538 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
POLR2F-213ENST00000606538 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
POLR2F-213ENST00000606538 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
POLR2F-213ENST00000606538 GNAI3P08754 354 aa16.59■□□□□ 0.25
POLR2F-213ENST00000606538 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
POLR2F-213ENST00000606538 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
POLR2F-213ENST00000606538 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
POLR2F-213ENST00000606538 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
POLR2F-213ENST00000606538 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
POLR2F-213ENST00000606538 C21orf2O43822 256 aa16.57■□□□□ 0.24
POLR2F-213ENST00000606538 BBOX1O75936 387 aa16.57■□□□□ 0.24
POLR2F-213ENST00000606538 ITGA6P23229 1130 aa16.57■□□□□ 0.24
POLR2F-213ENST00000606538 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
POLR2F-213ENST00000606538 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
POLR2F-213ENST00000606538 UTRNP46939 3433 aa16.57■□□□□ 0.24
POLR2F-213ENST00000606538 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
POLR2F-213ENST00000606538 GNAI2P04899 355 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 GPR162Q16538 588 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
POLR2F-213ENST00000606538 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 LTBP1Q14766 1721 aa16.56■□□□□ 0.24
POLR2F-213ENST00000606538 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
POLR2F-213ENST00000606538 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
POLR2F-213ENST00000606538 ATP6V0A2Q9Y487 856 aa16.55■□□□□ 0.24
POLR2F-213ENST00000606538 SBF1O95248 1867 aa16.54■□□□□ 0.24
POLR2F-213ENST00000606538 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
POLR2F-213ENST00000606538 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
POLR2F-213ENST00000606538 MTX1Q13505 466 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms