RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 TTC21BQ7Z4L5 1316 aa12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 H3BM21 787 aa12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 CBLBQ13191 982 aa12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 COG3Q96JB2 828 aa12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
CSNK1A1-209ENST00000606299 MCCD1P59942 119 aaPredicted RBP12.97□□□□□ -0.33
CSNK1A1-209ENST00000606299 NR1H3Q13133 447 aa12.97□□□□□ -0.33
CSNK1A1-209ENST00000606299 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
CSNK1A1-209ENST00000606299 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.33
CSNK1A1-209ENST00000606299 SPINT1O43278 529 aa12.96□□□□□ -0.33
CSNK1A1-209ENST00000606299 GPR37L1O60883 481 aa12.96□□□□□ -0.33
CSNK1A1-209ENST00000606299 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
CSNK1A1-209ENST00000606299 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
CSNK1A1-209ENST00000606299 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.34
CSNK1A1-209ENST00000606299 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.34
CSNK1A1-209ENST00000606299 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.34
CSNK1A1-209ENST00000606299 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
CSNK1A1-209ENST00000606299 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 SOBPA7XYQ1 873 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 NEFLP07196 543 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 LCE2CQ5TA81 110 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 IRF7Q92985 503 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
CSNK1A1-209ENST00000606299 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
CSNK1A1-209ENST00000606299 ERVH48-1M5A8F1 160 aa12.94□□□□□ -0.34
CSNK1A1-209ENST00000606299 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
CSNK1A1-209ENST00000606299 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
CSNK1A1-209ENST00000606299 RAB15P59190 212 aa12.94□□□□□ -0.34
CSNK1A1-209ENST00000606299 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 FBLN1P23142 703 aa12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 DNMT3LQ9UJW3 386 aa12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 SUPT16HQ9Y5B9 1047 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 AATKQ6ZMQ8 1374 aa12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
CSNK1A1-209ENST00000606299 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 APAF1O14727 1248 aa12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 TMPRSS4Q9NRS4 437 aa12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
CSNK1A1-209ENST00000606299 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 ADH1AP07327 375 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 TMEM94Q12767 1356 aa12.91□□□□□ -0.34
CSNK1A1-209ENST00000606299 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 ALS2Q96Q42 1657 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 LILRA1O75019 489 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 INSM1Q01101 510 aaPredicted RBP12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
CSNK1A1-209ENST00000606299 VEGFBP49765 207 aa12.89□□□□□ -0.35
CSNK1A1-209ENST00000606299 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
CSNK1A1-209ENST00000606299 DCCP43146 1447 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 ATF3P18847 181 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 RELBQ01201 579 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 MST1RQ04912 1400 aa12.88□□□□□ -0.35
CSNK1A1-209ENST00000606299 MSH6P52701 1360 aa12.87□□□□□ -0.35
CSNK1A1-209ENST00000606299 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
CSNK1A1-209ENST00000606299 PSME1Q06323 249 aa12.87□□□□□ -0.35
CSNK1A1-209ENST00000606299 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
CSNK1A1-209ENST00000606299 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
CSNK1A1-209ENST00000606299 NFAT5O94916 1531 aa12.84□□□□□ -0.35
CSNK1A1-209ENST00000606299 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
CSNK1A1-209ENST00000606299 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
CSNK1A1-209ENST00000606299 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
CSNK1A1-209ENST00000606299 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
CSNK1A1-209ENST00000606299 PPFIA3O75145 1194 aa12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 IL13P35225 146 aa12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 GMPRP36959 345 aa12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 PTGIRP43119 386 aa12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 POLMQ9NP87 494 aaPredicted RBP12.83□□□□□ -0.36
CSNK1A1-209ENST00000606299 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms