RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
CCDC12-212ENST00000605358 LAMB2P55268 1798 aa23.21■■□□□ 1.31
CCDC12-212ENST00000605358 HCLS1P14317 486 aaPredicted RBP23.2■■□□□ 1.3
CCDC12-212ENST00000605358 CIAPIN1Q6FI81 312 aa23.2■■□□□ 1.3
CCDC12-212ENST00000605358 PLBD2Q8NHP8 589 aa23.2■■□□□ 1.3
CCDC12-212ENST00000605358 DBF4Q9UBU7 674 aaPredicted RBP23.19■■□□□ 1.3
CCDC12-212ENST00000605358 LBX1P52954 281 aa23.18■■□□□ 1.3
CCDC12-212ENST00000605358 CST9Q5W186 159 aa23.18■■□□□ 1.3
CCDC12-212ENST00000605358 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
CCDC12-212ENST00000605358 HHIPL1Q96JK4 782 aa23.18■■□□□ 1.3
CCDC12-212ENST00000605358 TLL2Q9Y6L7 1015 aa23.18■■□□□ 1.3
CCDC12-212ENST00000605358 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
CCDC12-212ENST00000605358 NECTIN2Q92692 538 aa23.17■■□□□ 1.3
CCDC12-212ENST00000605358 CAPNS2Q96L46 248 aa23.17■■□□□ 1.3
CCDC12-212ENST00000605358 BEGAINQ9BUH8 593 aa23.17■■□□□ 1.3
CCDC12-212ENST00000605358 HYPKQ9NX55 129 aa23.17■■□□□ 1.3
CCDC12-212ENST00000605358 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
CCDC12-212ENST00000605358 THSD7BQ9C0I4 1608 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 HSPA8P11142 646 aaKnown RBP23.16■■□□□ 1.3
CCDC12-212ENST00000605358 MAP2K2P36507 400 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 GMPSP49915 693 aaPredicted RBP23.16■■□□□ 1.3
CCDC12-212ENST00000605358 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
CCDC12-212ENST00000605358 SF3B3Q15393 1217 aaKnown RBP23.16■■□□□ 1.3
CCDC12-212ENST00000605358 NEUROD2Q15784 382 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 SLC51AQ86UW1 340 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 BCL2L13Q9BXK5 485 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
CCDC12-212ENST00000605358 CFAP44Q96MT7 982 aa23.15■■□□□ 1.3
CCDC12-212ENST00000605358 GPR101Q96P66 508 aaPredicted RBP23.15■■□□□ 1.3
CCDC12-212ENST00000605358 ISCA1Q9BUE6 129 aa23.15■■□□□ 1.3
CCDC12-212ENST00000605358 HSP90B1P14625 803 aaKnown RBP23.14■■□□□ 1.29
CCDC12-212ENST00000605358 DPF2Q92785 391 aa23.14■■□□□ 1.29
CCDC12-212ENST00000605358 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
CCDC12-212ENST00000605358 TRAF5O00463 557 aa23.13■■□□□ 1.29
CCDC12-212ENST00000605358 CDC37L1Q7L3B6 337 aa23.13■■□□□ 1.29
CCDC12-212ENST00000605358 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
CCDC12-212ENST00000605358 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
CCDC12-212ENST00000605358 H7C1D1 291 aa23.12■■□□□ 1.29
CCDC12-212ENST00000605358 KRT24Q2M2I5 525 aa23.12■■□□□ 1.29
CCDC12-212ENST00000605358 SAPCD2Q86UD0 394 aa23.12■■□□□ 1.29
CCDC12-212ENST00000605358 CA12O43570 354 aa23.11■■□□□ 1.29
CCDC12-212ENST00000605358 RAD17O75943 681 aa23.11■■□□□ 1.29
CCDC12-212ENST00000605358 FMR1Q06787 632 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC12-212ENST00000605358 WASHC4Q2M389 1173 aa23.11■■□□□ 1.29
CCDC12-212ENST00000605358 CYP4F22Q6NT55 531 aa23.11■■□□□ 1.29
CCDC12-212ENST00000605358 PAXIP1Q6ZW49 1069 aaPredicted RBP23.11■■□□□ 1.29
CCDC12-212ENST00000605358 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
CCDC12-212ENST00000605358 CNOT7Q9UIV1 285 aaKnown RBP23.11■■□□□ 1.29
CCDC12-212ENST00000605358 DDX60Q8IY21 1712 aaKnown RBP23.11■■□□□ 1.29
CCDC12-212ENST00000605358 CELF2O95319 508 aaKnown RBP23.1■■□□□ 1.29
CCDC12-212ENST00000605358 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
CCDC12-212ENST00000605358 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
CCDC12-212ENST00000605358 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
CCDC12-212ENST00000605358 TAF1P21675 1872 aa23.09■■□□□ 1.29
CCDC12-212ENST00000605358 YDJCA8MPS7 323 aa23.09■■□□□ 1.29
CCDC12-212ENST00000605358 RPS12P25398 132 aaKnown RBP23.09■■□□□ 1.29
CCDC12-212ENST00000605358 CALD1Q05682 793 aaKnown RBP23.09■■□□□ 1.29
CCDC12-212ENST00000605358 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
CCDC12-212ENST00000605358 EYA3Q99504 573 aa23.09■■□□□ 1.29
CCDC12-212ENST00000605358 NSFL1CQ9UNZ2 370 aaKnown RBP23.09■■□□□ 1.29
CCDC12-212ENST00000605358 HIRAP54198 1017 aaPredicted RBP23.08■■□□□ 1.29
CCDC12-212ENST00000605358 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.29
CCDC12-212ENST00000605358 ZNF853P0CG23 659 aa23.07■■□□□ 1.28
CCDC12-212ENST00000605358 CELF1Q92879 486 aaKnown RBP23.07■■□□□ 1.28
CCDC12-212ENST00000605358 GLIS2Q9BZE0 524 aaPredicted RBP23.07■■□□□ 1.28
CCDC12-212ENST00000605358 ATP5J2-PTCD1G3V325 749 aa23.06■■□□□ 1.28
CCDC12-212ENST00000605358 IRS4O14654 1257 aaPredicted RBP23.06■■□□□ 1.28
CCDC12-212ENST00000605358 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
CCDC12-212ENST00000605358 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
CCDC12-212ENST00000605358 ZBTB38Q8NAP3 1195 aaPredicted RBP23.06■■□□□ 1.28
CCDC12-212ENST00000605358 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
CCDC12-212ENST00000605358 ABHD8Q96I13 439 aa23.05■■□□□ 1.28
CCDC12-212ENST00000605358 MBIPQ9NS73 344 aa23.05■■□□□ 1.28
CCDC12-212ENST00000605358 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
CCDC12-212ENST00000605358 PODXL2Q9NZ53 605 aa23.05■■□□□ 1.28
CCDC12-212ENST00000605358 C6orf229H3BNL8 230 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 PSMD14O00487 310 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 GNAI1P63096 354 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 GRM1Q13255 1194 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 RIC3Q7Z5B4 369 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 TRPM4Q8TD43 1214 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 POLLQ9UGP5 575 aa23.04■■□□□ 1.28
CCDC12-212ENST00000605358 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
CCDC12-212ENST00000605358 GPSM2P81274 684 aa23.02■■□□□ 1.28
CCDC12-212ENST00000605358 NOGQ13253 232 aa23.02■■□□□ 1.28
CCDC12-212ENST00000605358 ECE2O60344 883 aa23.01■■□□□ 1.27
CCDC12-212ENST00000605358 AOC2O75106 756 aa23.01■■□□□ 1.27
CCDC12-212ENST00000605358 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
CCDC12-212ENST00000605358 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
CCDC12-212ENST00000605358 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
CCDC12-212ENST00000605358 ZBTB12Q9Y330 459 aaPredicted RBP23.01■■□□□ 1.27
CCDC12-212ENST00000605358 RIMBP2O15034 1052 aa23■■□□□ 1.27
CCDC12-212ENST00000605358 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
CCDC12-212ENST00000605358 USP48Q86UV5 1035 aa23■■□□□ 1.27
CCDC12-212ENST00000605358 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
CCDC12-212ENST00000605358 DDX58O95786 925 aaKnown RBP22.99■■□□□ 1.27
CCDC12-212ENST00000605358 PCCAP05165 728 aaPredicted RBP22.99■■□□□ 1.27
CCDC12-212ENST00000605358 VIL1P09327 827 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms