RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
TUBE1-208ENST00000604743 ATP6V0A2Q9Y487 856 aa18.38■□□□□ 0.53
TUBE1-208ENST00000604743 MYH3P11055 1940 aa18.37■□□□□ 0.53
TUBE1-208ENST00000604743 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
TUBE1-208ENST00000604743 PDE8AO60658 829 aa18.37■□□□□ 0.53
TUBE1-208ENST00000604743 IARSP41252 1262 aaKnown RBP18.37■□□□□ 0.53
TUBE1-208ENST00000604743 DPY19L2Q6NUT2 758 aa18.37■□□□□ 0.53
TUBE1-208ENST00000604743 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
TUBE1-208ENST00000604743 PSMD1Q99460 953 aa18.36■□□□□ 0.53
TUBE1-208ENST00000604743 SNED1Q8TER0 1413 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 GCKRQ14397 625 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 UBE3BQ7Z3V4 1068 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 SP8Q8IXZ3 490 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
TUBE1-208ENST00000604743 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
TUBE1-208ENST00000604743 COL4A1P02462 1669 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 CDHR2Q9BYE9 1310 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
TUBE1-208ENST00000604743 MPNDQ8N594 471 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
TUBE1-208ENST00000604743 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
TUBE1-208ENST00000604743 H7C1W4 665 aa18.33■□□□□ 0.52
TUBE1-208ENST00000604743 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
TUBE1-208ENST00000604743 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
TUBE1-208ENST00000604743 LARGE2Q8N3Y3 721 aa18.33■□□□□ 0.52
TUBE1-208ENST00000604743 JDP2Q8WYK2 163 aa18.33■□□□□ 0.52
TUBE1-208ENST00000604743 PPIP5K2O43314 1243 aa18.32■□□□□ 0.52
TUBE1-208ENST00000604743 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
TUBE1-208ENST00000604743 TRMT2AQ8IZ69 625 aaKnown RBP18.32■□□□□ 0.52
TUBE1-208ENST00000604743 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
TUBE1-208ENST00000604743 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
TUBE1-208ENST00000604743 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 CTSWP56202 376 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 AOC3Q16853 763 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 BEND3Q5T5X7 828 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
TUBE1-208ENST00000604743 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
TUBE1-208ENST00000604743 LRRC37AA6NMS7 1700 aa18.3■□□□□ 0.52
TUBE1-208ENST00000604743 TOMM70O94826 608 aa18.3■□□□□ 0.52
TUBE1-208ENST00000604743 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
TUBE1-208ENST00000604743 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
TUBE1-208ENST00000604743 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 COL4A5P29400 1685 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 GPSM2P81274 684 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 GREM2Q9H772 168 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
TUBE1-208ENST00000604743 POTECB2RU33 542 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 FZD9O00144 591 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 CASP7P55210 303 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
TUBE1-208ENST00000604743 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 RTFDC1Q9BY42 306 aaPredicted RBP18.28■□□□□ 0.52
TUBE1-208ENST00000604743 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 GJA3Q9Y6H8 435 aa18.28■□□□□ 0.52
TUBE1-208ENST00000604743 C6orf229H3BNL8 230 aa18.27■□□□□ 0.52
TUBE1-208ENST00000604743 ALDH1L2Q3SY69 923 aa18.27■□□□□ 0.52
TUBE1-208ENST00000604743 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
TUBE1-208ENST00000604743 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
TUBE1-208ENST00000604743 RIMBP2O15034 1052 aa18.26■□□□□ 0.51
TUBE1-208ENST00000604743 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
TUBE1-208ENST00000604743 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
TUBE1-208ENST00000604743 PTPRCP08575 1304 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 GRM8O00222 908 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
TUBE1-208ENST00000604743 GPR101Q96P66 508 aaPredicted RBP18.25■□□□□ 0.51
TUBE1-208ENST00000604743 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
TUBE1-208ENST00000604743 SCN4AP35499 1836 aa18.24■□□□□ 0.51
TUBE1-208ENST00000604743 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
TUBE1-208ENST00000604743 ITGA6P23229 1130 aa18.24■□□□□ 0.51
TUBE1-208ENST00000604743 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
TUBE1-208ENST00000604743 WASHC4Q2M389 1173 aa18.24■□□□□ 0.51
TUBE1-208ENST00000604743 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
TUBE1-208ENST00000604743 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
TUBE1-208ENST00000604743 GPC2Q8N158 579 aa18.23■□□□□ 0.51
TUBE1-208ENST00000604743 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
TUBE1-208ENST00000604743 ZNRF3Q9ULT6 936 aa18.23■□□□□ 0.51
TUBE1-208ENST00000604743 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
TUBE1-208ENST00000604743 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 UFL1O94874 794 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 CSF1RP07333 972 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 FOXO4P98177 505 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 L3MBTL3Q96JM7 780 aaPredicted RBP18.22■□□□□ 0.51
TUBE1-208ENST00000604743 EYA3Q99504 573 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 LTBP1Q14766 1721 aa18.22■□□□□ 0.51
TUBE1-208ENST00000604743 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 CXCL9Q07325 125 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 EPHA10Q5JZY3 1008 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms