RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
SCN1B-205ENST00000602150 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
SCN1B-205ENST00000602150 IL25Q9H293 177 aa13.15□□□□□ -0.3
SCN1B-205ENST00000602150 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
SCN1B-205ENST00000602150 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 PRIMPOLQ96LW4 560 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 ARID3AQ99856 593 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 SASH1O94885 1247 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 EAF2Q96CJ1 260 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 JCADQ9P266 1359 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 TIMM10P62072 90 aa13.14□□□□□ -0.31
SCN1B-205ENST00000602150 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
SCN1B-205ENST00000602150 NPHP1O15259 732 aa13.13□□□□□ -0.31
SCN1B-205ENST00000602150 GTPBP4Q9BZE4 634 aaKnown RBP13.13□□□□□ -0.31
SCN1B-205ENST00000602150 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
SCN1B-205ENST00000602150 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-205ENST00000602150 FGD1P98174 961 aa13.12□□□□□ -0.31
SCN1B-205ENST00000602150 POLA2Q14181 598 aa13.12□□□□□ -0.31
SCN1B-205ENST00000602150 CHAMP1Q96JM3 812 aa13.12□□□□□ -0.31
SCN1B-205ENST00000602150 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
SCN1B-205ENST00000602150 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
SCN1B-205ENST00000602150 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
SCN1B-205ENST00000602150 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
SCN1B-205ENST00000602150 KIF20AO95235 890 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 LRP6O75581 1613 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 BCL9O00512 1426 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 MBD3O95983 291 aa13.11□□□□□ -0.31
SCN1B-205ENST00000602150 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-205ENST00000602150 PARP4Q9UKK3 1724 aaKnown RBP13.1□□□□□ -0.31
SCN1B-205ENST00000602150 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-205ENST00000602150 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
SCN1B-205ENST00000602150 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
SCN1B-205ENST00000602150 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
SCN1B-205ENST00000602150 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
SCN1B-205ENST00000602150 GNPATO15228 680 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 KCPQ6ZWJ8 1503 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 TNS2Q63HR2 1409 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 TRIM37O94972 964 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 TSC1Q92574 1164 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
SCN1B-205ENST00000602150 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
SCN1B-205ENST00000602150 ST18O60284 1047 aa13.08□□□□□ -0.31
SCN1B-205ENST00000602150 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.31
SCN1B-205ENST00000602150 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.31
SCN1B-205ENST00000602150 GREM2Q9H772 168 aa13.08□□□□□ -0.31
SCN1B-205ENST00000602150 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.31
SCN1B-205ENST00000602150 VPS72Q15906 364 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 GORABQ5T7V8 394 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-205ENST00000602150 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-205ENST00000602150 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-205ENST00000602150 CPA1P15085 419 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 CBX1P83916 185 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
SCN1B-205ENST00000602150 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-205ENST00000602150 LETM1O95202 739 aaPredicted RBP13.07□□□□□ -0.32
SCN1B-205ENST00000602150 BRD1O95696 1058 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 FOXO4P98177 505 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
SCN1B-205ENST00000602150 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
SCN1B-205ENST00000602150 PLCH1Q4KWH8 1693 aa13.07□□□□□ -0.32
SCN1B-205ENST00000602150 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
SCN1B-205ENST00000602150 TAF5LO75529 589 aa13.06□□□□□ -0.32
SCN1B-205ENST00000602150 ADORA1P30542 326 aa13.06□□□□□ -0.32
SCN1B-205ENST00000602150 KCNJ4P48050 445 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms