RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MX1P20591 662 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 IL1RAPL2Q9NP60 686 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
IRF3-229ENST00000601373 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
IRF3-229ENST00000601373 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
IRF3-229ENST00000601373 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
IRF3-229ENST00000601373 SUSD4Q5VX71 490 aa16.84■□□□□ 0.29
IRF3-229ENST00000601373 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
IRF3-229ENST00000601373 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
IRF3-229ENST00000601373 RFC4P35249 363 aa16.83■□□□□ 0.28
IRF3-229ENST00000601373 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
IRF3-229ENST00000601373 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
IRF3-229ENST00000601373 CIAO1O76071 339 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 SASH1O94885 1247 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
IRF3-229ENST00000601373 CTSWP56202 376 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
IRF3-229ENST00000601373 GPR162Q16538 588 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 TTLL11Q8NHH1 800 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 SIL1Q9H173 461 aa16.82■□□□□ 0.28
IRF3-229ENST00000601373 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
IRF3-229ENST00000601373 NTSR2O95665 410 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
IRF3-229ENST00000601373 SSFA2P28290 1259 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 NYXQ9GZU5 481 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 BCL2L12Q9HB09 334 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
IRF3-229ENST00000601373 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 EYA2O00167 538 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
IRF3-229ENST00000601373 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 GPR108Q9NPR9 543 aa16.8■□□□□ 0.28
IRF3-229ENST00000601373 ERC2O15083 957 aa16.79■□□□□ 0.28
IRF3-229ENST00000601373 CDC45O75419 566 aa16.79■□□□□ 0.28
IRF3-229ENST00000601373 POLD1P28340 1107 aa16.79■□□□□ 0.28
IRF3-229ENST00000601373 AACSQ86V21 672 aa16.79■□□□□ 0.28
IRF3-229ENST00000601373 SYNE4Q8N205 404 aa16.79■□□□□ 0.28
IRF3-229ENST00000601373 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
IRF3-229ENST00000601373 MYH3P11055 1940 aa16.78■□□□□ 0.28
IRF3-229ENST00000601373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
IRF3-229ENST00000601373 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
IRF3-229ENST00000601373 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
IRF3-229ENST00000601373 ECHDC1Q9NTX5 307 aa16.78■□□□□ 0.28
IRF3-229ENST00000601373 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
IRF3-229ENST00000601373 FAM177BA6PVY3 158 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
IRF3-229ENST00000601373 PHF14O94880 888 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 SDSP20132 328 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 ITGA6P23229 1130 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 TFCP2Q12800 502 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 TPTE2Q6XPS3 522 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 ATG9AQ7Z3C6 839 aa16.77■□□□□ 0.28
IRF3-229ENST00000601373 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
IRF3-229ENST00000601373 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
IRF3-229ENST00000601373 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
IRF3-229ENST00000601373 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
IRF3-229ENST00000601373 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 GREM2Q9H772 168 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
IRF3-229ENST00000601373 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
IRF3-229ENST00000601373 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
IRF3-229ENST00000601373 AMIGO3Q86WK7 504 aa16.75■□□□□ 0.27
IRF3-229ENST00000601373 PI4K2BQ8TCG2 481 aa16.75■□□□□ 0.27
IRF3-229ENST00000601373 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
IRF3-229ENST00000601373 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
IRF3-229ENST00000601373 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
IRF3-229ENST00000601373 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
IRF3-229ENST00000601373 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 NBPF5PQ86XG9 351 aaPredicted RBP16.74■□□□□ 0.27
IRF3-229ENST00000601373 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
IRF3-229ENST00000601373 LAMB2P55268 1798 aa16.74■□□□□ 0.27
IRF3-229ENST00000601373 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
IRF3-229ENST00000601373 SEC24BO95487 1268 aa16.73■□□□□ 0.27
IRF3-229ENST00000601373 TBC1D9Q6ZT07 1266 aa16.73■□□□□ 0.27
IRF3-229ENST00000601373 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
IRF3-229ENST00000601373 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
IRF3-229ENST00000601373 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 PUS3Q9BZE2 481 aaKnown RBP16.72■□□□□ 0.27
IRF3-229ENST00000601373 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
IRF3-229ENST00000601373 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms