RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ME1P48163 572 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 PICALMQ13492 652 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 NAT10Q9H0A0 1025 aaKnown RBP12.98□□□□□ -0.33
ZNF558-207ENST00000601372 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
ZNF558-207ENST00000601372 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 CHMP4BP1P59074 171 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 ARHGEF25Q86VW2 580 aa12.98□□□□□ -0.33
ZNF558-207ENST00000601372 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 TRIM22Q8IYM9 498 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 STK38Q15208 465 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 ATP2B3Q16720 1220 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
ZNF558-207ENST00000601372 PPFIA3O75145 1194 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 NF2P35240 595 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 KCNQ4P56696 695 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
ZNF558-207ENST00000601372 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
ZNF558-207ENST00000601372 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
ZNF558-207ENST00000601372 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 PARP10Q53GL7 1025 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 UFL1O94874 794 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 UQCRFS1P1P0C7P4 283 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ZNF76P36508 570 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
ZNF558-207ENST00000601372 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.33
ZNF558-207ENST00000601372 TTLL5Q6EMB2 1281 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
ZNF558-207ENST00000601372 JCADQ9P266 1359 aa12.96□□□□□ -0.34
ZNF558-207ENST00000601372 GJB2P29033 226 aa12.96□□□□□ -0.34
ZNF558-207ENST00000601372 TMX3Q96JJ7 454 aa12.96□□□□□ -0.34
ZNF558-207ENST00000601372 CABP5Q9NP86 173 aa12.96□□□□□ -0.34
ZNF558-207ENST00000601372 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.34
ZNF558-207ENST00000601372 THRAP3Q9Y2W1 955 aaKnown RBP12.96□□□□□ -0.34
ZNF558-207ENST00000601372 INSRP06213 1382 aa12.96□□□□□ -0.34
ZNF558-207ENST00000601372 EIF6P56537 245 aaKnown RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 GOLGA6L1Q8N7Z2 621 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 TPM1P09493 284 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
ZNF558-207ENST00000601372 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
ZNF558-207ENST00000601372 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 PDE1AP54750 535 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 SIK1P57059 783 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 A0A0U1RQG5 324 aaPredicted RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 IBSPP21815 317 aaPredicted RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 ZNF496Q96IT1 587 aaPredicted RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 PDE6BP35913 854 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 CYP7A1P22680 504 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 CCDC183Q5T5S1 534 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
ZNF558-207ENST00000601372 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
ZNF558-207ENST00000601372 ZNF213O14771 459 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
ZNF558-207ENST00000601372 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 AGLP35573 1532 aa12.93□□□□□ -0.34
ZNF558-207ENST00000601372 EAPPQ56P03 285 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 PREX1Q8TCU6 1659 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 ITGA6P23229 1130 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 SNX21Q969T3 373 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 NECAB1Q8N987 351 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 G2E3Q7L622 706 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms