RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 COL4A5P29400 1685 aa14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 DDX60Q8IY21 1712 aaKnown RBP14.92□□□□□ -0.02
SOX2-OT-233ENST00000600778 DDX58O95786 925 aaKnown RBP14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 EPHX2P34913 555 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 SF3B3Q15393 1217 aaKnown RBP14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 SUPT20HQ8NEM7 779 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 SCN4AP35499 1836 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 TAF1P21675 1872 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 IL16Q14005 1332 aa14.91□□□□□ -0.02
SOX2-OT-233ENST00000600778 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 LDHDQ86WU2 507 aa14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 FAM9BQ8IZU0 186 aa14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 ZBTB38Q8NAP3 1195 aaPredicted RBP14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 METTL22Q9BUU2 404 aaPredicted RBP14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 RTFDC1Q9BY42 306 aaPredicted RBP14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
SOX2-OT-233ENST00000600778 JARID2Q92833 1246 aaPredicted RBP14.89□□□□□ -0.03
SOX2-OT-233ENST00000600778 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
SOX2-OT-233ENST00000600778 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
SOX2-OT-233ENST00000600778 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
SOX2-OT-233ENST00000600778 PI4KAP2A4QPH2 592 aa14.88□□□□□ -0.03
SOX2-OT-233ENST00000600778 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
SOX2-OT-233ENST00000600778 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
SOX2-OT-233ENST00000600778 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-233ENST00000600778 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
SOX2-OT-233ENST00000600778 PCNTO95613 3336 aa14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 PCCAP05165 728 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 HSP90B1P14625 803 aaKnown RBP14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 LMOD1P29536 600 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 KSR2Q6VAB6 950 aa14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 G2E3Q7L622 706 aa14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 WDR63Q8IWG1 891 aa14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
SOX2-OT-233ENST00000600778 PDE8AO60658 829 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 EPS15P42566 896 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 SCNN1DP51172 638 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 CXCL9Q07325 125 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 KIAA2012Q0VF49 1180 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 SEC31BQ9NQW1 1179 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
SOX2-OT-233ENST00000600778 IGKV5-2P06315 115 aa14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 GPSM2P81274 684 aa14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 MAP1SQ66K74 1059 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 DIEXFQ68CQ4 756 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 JMYQ8N9B5 988 aa14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-233ENST00000600778 COL4A1P02462 1669 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 LTBP1Q14766 1721 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 C6orf229H3BNL8 230 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 RIMBP2O15034 1052 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 RAD17O75943 681 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 WASHC4Q2M389 1173 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 CWF19L2Q2TBE0 894 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 CIAPIN1Q6FI81 312 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
SOX2-OT-233ENST00000600778 VAMP4O75379 141 aa14.83□□□□□ -0.04
SOX2-OT-233ENST00000600778 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-233ENST00000600778 POLLQ9UGP5 575 aa14.83□□□□□ -0.04
SOX2-OT-233ENST00000600778 LRRC37AA6NMS7 1700 aa14.83□□□□□ -0.04
SOX2-OT-233ENST00000600778 DUOX1Q9NRD9 1551 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 YDJCA8MPS7 323 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 NEURL1BA8MQ27 555 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 GMPSP49915 693 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 FLIIQ13045 1269 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 TNIP1Q15025 636 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 USP50Q70EL3 339 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 GPR101Q96P66 508 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 BCL2L13Q9BXK5 485 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 GPRC5DQ9NZD1 345 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 MKRN1Q9UHC7 482 aaKnown RBP14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 CDHR2Q9BYE9 1310 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 ADAMTSL1Q8N6G6 1762 aa14.82□□□□□ -0.04
SOX2-OT-233ENST00000600778 TMEM88BA6NKF7 163 aa14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 CCER2I3L3R5 266 aa14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 TBC1D16Q8TBP0 767 aa14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 EYA3Q99504 573 aa14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 DBNDD1Q9H9R9 158 aa14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 ADARB2Q9NS39 739 aaKnown RBP14.81□□□□□ -0.04
SOX2-OT-233ENST00000600778 CTSWP56202 376 aa14.8□□□□□ -0.04
SOX2-OT-233ENST00000600778 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
SOX2-OT-233ENST00000600778 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
SOX2-OT-233ENST00000600778 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
SOX2-OT-233ENST00000600778 ANKIB1Q9P2G1 1089 aa14.8□□□□□ -0.04
SOX2-OT-233ENST00000600778 H7C1W4 665 aa14.79□□□□□ -0.04
SOX2-OT-233ENST00000600778 TTLL11Q8NHH1 800 aa14.79□□□□□ -0.04
SOX2-OT-233ENST00000600778 DNAAF4Q8WXU2 420 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms