RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CTSWP56202 376 aa16.39■□□□□ 0.21
SRRM1-223ENST00000600523 GRAPQ13588 217 aa16.39■□□□□ 0.21
SRRM1-223ENST00000600523 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
SRRM1-223ENST00000600523 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
SRRM1-223ENST00000600523 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
SRRM1-223ENST00000600523 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
SRRM1-223ENST00000600523 ABCC4O15439 1325 aa16.39■□□□□ 0.21
SRRM1-223ENST00000600523 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
SRRM1-223ENST00000600523 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
SRRM1-223ENST00000600523 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
SRRM1-223ENST00000600523 LAMB2P55268 1798 aa16.37■□□□□ 0.21
SRRM1-223ENST00000600523 YY1P25490 414 aa16.37■□□□□ 0.21
SRRM1-223ENST00000600523 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
SRRM1-223ENST00000600523 CHMP3Q9Y3E7 222 aa16.37■□□□□ 0.21
SRRM1-223ENST00000600523 ATP6V0A2Q9Y487 856 aa16.37■□□□□ 0.21
SRRM1-223ENST00000600523 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
SRRM1-223ENST00000600523 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
SRRM1-223ENST00000600523 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
SRRM1-223ENST00000600523 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
SRRM1-223ENST00000600523 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
SRRM1-223ENST00000600523 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SRRM1-223ENST00000600523 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
SRRM1-223ENST00000600523 TRIM27P14373 513 aa16.35■□□□□ 0.21
SRRM1-223ENST00000600523 LMNB1P20700 586 aa16.35■□□□□ 0.21
SRRM1-223ENST00000600523 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
SRRM1-223ENST00000600523 SUPT20HQ8NEM7 779 aa16.35■□□□□ 0.21
SRRM1-223ENST00000600523 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
SRRM1-223ENST00000600523 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
SRRM1-223ENST00000600523 CASP7P55210 303 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 IFIT5Q13325 482 aaKnown RBP16.34■□□□□ 0.21
SRRM1-223ENST00000600523 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
SRRM1-223ENST00000600523 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
SRRM1-223ENST00000600523 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
SRRM1-223ENST00000600523 CHD4Q14839 1912 aa16.33■□□□□ 0.21
SRRM1-223ENST00000600523 GNAI3P08754 354 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
SRRM1-223ENST00000600523 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
SRRM1-223ENST00000600523 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
SRRM1-223ENST00000600523 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.2
SRRM1-223ENST00000600523 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 GREM2Q9H772 168 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 UTYO14607 1347 aa16.33■□□□□ 0.2
SRRM1-223ENST00000600523 CSF1RP07333 972 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 ITGA6P23229 1130 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 RASSF7Q02833 373 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 MPNDQ8N594 471 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 CELF1Q92879 486 aaKnown RBP16.32■□□□□ 0.2
SRRM1-223ENST00000600523 PSMD1Q99460 953 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
SRRM1-223ENST00000600523 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
SRRM1-223ENST00000600523 NFKBIEO00221 500 aa16.31■□□□□ 0.2
SRRM1-223ENST00000600523 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
SRRM1-223ENST00000600523 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
SRRM1-223ENST00000600523 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
SRRM1-223ENST00000600523 MYH3P11055 1940 aa16.3■□□□□ 0.2
SRRM1-223ENST00000600523 FOXO4P98177 505 aa16.3■□□□□ 0.2
SRRM1-223ENST00000600523 ITPRIPQ8IWB1 547 aa16.3■□□□□ 0.2
SRRM1-223ENST00000600523 JDP2Q8WYK2 163 aa16.3■□□□□ 0.2
SRRM1-223ENST00000600523 SUCLG2Q96I99 432 aa16.3■□□□□ 0.2
SRRM1-223ENST00000600523 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
SRRM1-223ENST00000600523 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
SRRM1-223ENST00000600523 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
SRRM1-223ENST00000600523 BICC1Q9H694 974 aaKnown RBP16.29■□□□□ 0.2
SRRM1-223ENST00000600523 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
SRRM1-223ENST00000600523 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
SRRM1-223ENST00000600523 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
SRRM1-223ENST00000600523 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
SRRM1-223ENST00000600523 EYA3Q99504 573 aa16.28■□□□□ 0.2
SRRM1-223ENST00000600523 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
SRRM1-223ENST00000600523 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
SRRM1-223ENST00000600523 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.2
SRRM1-223ENST00000600523 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.2
SRRM1-223ENST00000600523 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
SRRM1-223ENST00000600523 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.19
SRRM1-223ENST00000600523 XDHP47989 1333 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 G3V3G9 751 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 PPIP5K2O43314 1243 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 GNAI2P04899 355 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
SRRM1-223ENST00000600523 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 MEIS3Q99687 375 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
SRRM1-223ENST00000600523 GOLGB1Q14789 3259 aaKnown RBP16.26■□□□□ 0.19
SRRM1-223ENST00000600523 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 UFL1O94874 794 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 KCNJ4P48050 445 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
SRRM1-223ENST00000600523 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms