RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 GRAPLQ8TC17 118 aaPredicted RBP17.45■□□□□ 0.38
SNRPA-208ENST00000600456 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
SNRPA-208ENST00000600456 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
SNRPA-208ENST00000600456 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
SNRPA-208ENST00000600456 UTYO14607 1347 aa17.45■□□□□ 0.38
SNRPA-208ENST00000600456 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
SNRPA-208ENST00000600456 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
SNRPA-208ENST00000600456 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
SNRPA-208ENST00000600456 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
SNRPA-208ENST00000600456 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
SNRPA-208ENST00000600456 TRIM27P14373 513 aa17.43■□□□□ 0.38
SNRPA-208ENST00000600456 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
SNRPA-208ENST00000600456 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
SNRPA-208ENST00000600456 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
SNRPA-208ENST00000600456 INTS3Q68E01 1043 aaKnown RBP17.42■□□□□ 0.38
SNRPA-208ENST00000600456 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
SNRPA-208ENST00000600456 ATP6V0A2Q9Y487 856 aa17.42■□□□□ 0.38
SNRPA-208ENST00000600456 NFKBIEO00221 500 aa17.41■□□□□ 0.38
SNRPA-208ENST00000600456 CSF1RP07333 972 aa17.41■□□□□ 0.38
SNRPA-208ENST00000600456 SP8Q8IXZ3 490 aa17.41■□□□□ 0.38
SNRPA-208ENST00000600456 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
SNRPA-208ENST00000600456 SNED1Q8TER0 1413 aa17.4■□□□□ 0.38
SNRPA-208ENST00000600456 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
SNRPA-208ENST00000600456 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
SNRPA-208ENST00000600456 FOXO4P98177 505 aa17.4■□□□□ 0.38
SNRPA-208ENST00000600456 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
SNRPA-208ENST00000600456 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
SNRPA-208ENST00000600456 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
SNRPA-208ENST00000600456 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
SNRPA-208ENST00000600456 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
SNRPA-208ENST00000600456 CHD4Q14839 1912 aa17.39■□□□□ 0.37
SNRPA-208ENST00000600456 LMNB1P20700 586 aa17.39■□□□□ 0.37
SNRPA-208ENST00000600456 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNRPA-208ENST00000600456 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
SNRPA-208ENST00000600456 PSMD1Q99460 953 aa17.39■□□□□ 0.37
SNRPA-208ENST00000600456 GREM2Q9H772 168 aa17.39■□□□□ 0.37
SNRPA-208ENST00000600456 YY1P25490 414 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 RASSF7Q02833 373 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
SNRPA-208ENST00000600456 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 UTRNP46939 3433 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 MYH3P11055 1940 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 UBTFL1P0CB47 393 aaPredicted RBP17.37■□□□□ 0.37
SNRPA-208ENST00000600456 MS4A1P11836 297 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
SNRPA-208ENST00000600456 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
SNRPA-208ENST00000600456 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
SNRPA-208ENST00000600456 ITGA6P23229 1130 aa17.36■□□□□ 0.37
SNRPA-208ENST00000600456 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
SNRPA-208ENST00000600456 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
SNRPA-208ENST00000600456 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
SNRPA-208ENST00000600456 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
SNRPA-208ENST00000600456 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
SNRPA-208ENST00000600456 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
SNRPA-208ENST00000600456 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SNRPA-208ENST00000600456 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
SNRPA-208ENST00000600456 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
SNRPA-208ENST00000600456 GNAI3P08754 354 aa17.35■□□□□ 0.37
SNRPA-208ENST00000600456 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
SNRPA-208ENST00000600456 DPP8Q6V1X1 898 aaPredicted RBP17.35■□□□□ 0.37
SNRPA-208ENST00000600456 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
SNRPA-208ENST00000600456 RTFDC1Q9BY42 306 aaPredicted RBP17.35■□□□□ 0.37
SNRPA-208ENST00000600456 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
SNRPA-208ENST00000600456 TNNQ9UQP3 1299 aa17.35■□□□□ 0.37
SNRPA-208ENST00000600456 COL4A1P02462 1669 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 PRELPP51888 382 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 MPNDQ8N594 471 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
SNRPA-208ENST00000600456 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
SNRPA-208ENST00000600456 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
SNRPA-208ENST00000600456 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
SNRPA-208ENST00000600456 MEIS3Q99687 375 aa17.33■□□□□ 0.36
SNRPA-208ENST00000600456 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
SNRPA-208ENST00000600456 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
SNRPA-208ENST00000600456 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
SNRPA-208ENST00000600456 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
SNRPA-208ENST00000600456 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
SNRPA-208ENST00000600456 NSFL1CQ9UNZ2 370 aaKnown RBP17.32■□□□□ 0.36
SNRPA-208ENST00000600456 SBF1O95248 1867 aa17.31■□□□□ 0.36
SNRPA-208ENST00000600456 TAF1P21675 1872 aa17.31■□□□□ 0.36
SNRPA-208ENST00000600456 RLBP1P12271 317 aa17.31■□□□□ 0.36
SNRPA-208ENST00000600456 GPSM2P81274 684 aa17.31■□□□□ 0.36
SNRPA-208ENST00000600456 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
SNRPA-208ENST00000600456 XDHP47989 1333 aa17.3■□□□□ 0.36
SNRPA-208ENST00000600456 ITPRIPQ8IWB1 547 aa17.3■□□□□ 0.36
SNRPA-208ENST00000600456 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
SNRPA-208ENST00000600456 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
SNRPA-208ENST00000600456 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
SNRPA-208ENST00000600456 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
SNRPA-208ENST00000600456 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms