RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
USHBP1-210ENST00000600286 STYK1Q6J9G0 422 aa20.94■□□□□ 0.94
USHBP1-210ENST00000600286 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
USHBP1-210ENST00000600286 SRGNP10124 158 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 RLBP1P12271 317 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 CHRNA5P30532 468 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 CTSWP56202 376 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 SF3B3Q15393 1217 aaKnown RBP20.93■□□□□ 0.94
USHBP1-210ENST00000600286 TMX4Q9H1E5 349 aaPredicted RBP20.93■□□□□ 0.94
USHBP1-210ENST00000600286 COG6Q9Y2V7 657 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 CHMP3Q9Y3E7 222 aa20.93■□□□□ 0.94
USHBP1-210ENST00000600286 GNAI2P04899 355 aa20.92■□□□□ 0.94
USHBP1-210ENST00000600286 CASP7P55210 303 aa20.92■□□□□ 0.94
USHBP1-210ENST00000600286 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
USHBP1-210ENST00000600286 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
USHBP1-210ENST00000600286 MEIS3Q99687 375 aa20.91■□□□□ 0.94
USHBP1-210ENST00000600286 HOXA10P31260 410 aaPredicted RBP20.9■□□□□ 0.94
USHBP1-210ENST00000600286 DALRD3Q5D0E6 543 aaKnown RBP20.9■□□□□ 0.94
USHBP1-210ENST00000600286 TTLL11Q8NHH1 800 aa20.9■□□□□ 0.94
USHBP1-210ENST00000600286 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
USHBP1-210ENST00000600286 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
USHBP1-210ENST00000600286 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-210ENST00000600286 KCNA3P22001 575 aa20.89■□□□□ 0.93
USHBP1-210ENST00000600286 CCDC57Q2TAC2 916 aa20.89■□□□□ 0.93
USHBP1-210ENST00000600286 LMBR1LQ6UX01 489 aa20.89■□□□□ 0.93
USHBP1-210ENST00000600286 CDC5LQ99459 802 aaKnown RBP20.89■□□□□ 0.93
USHBP1-210ENST00000600286 DLEC1Q9Y238 1755 aa20.88■□□□□ 0.93
USHBP1-210ENST00000600286 BBOX1O75936 387 aa20.88■□□□□ 0.93
USHBP1-210ENST00000600286 CSF1RP07333 972 aa20.88■□□□□ 0.93
USHBP1-210ENST00000600286 IFIT5Q13325 482 aaKnown RBP20.88■□□□□ 0.93
USHBP1-210ENST00000600286 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
USHBP1-210ENST00000600286 C20orf194Q5TEA3 1177 aa20.88■□□□□ 0.93
USHBP1-210ENST00000600286 CCDC85AQ96PX6 553 aaPredicted RBP20.88■□□□□ 0.93
USHBP1-210ENST00000600286 ANKRD18BA2A2Z9 1011 aa20.87■□□□□ 0.93
USHBP1-210ENST00000600286 FOXO4P98177 505 aa20.87■□□□□ 0.93
USHBP1-210ENST00000600286 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
USHBP1-210ENST00000600286 BICC1Q9H694 974 aaKnown RBP20.87■□□□□ 0.93
USHBP1-210ENST00000600286 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
USHBP1-210ENST00000600286 IGHMBP2P38935 993 aaKnown RBP20.86■□□□□ 0.93
USHBP1-210ENST00000600286 C1QTNF8P60827 252 aa20.86■□□□□ 0.93
USHBP1-210ENST00000600286 GRAPQ13588 217 aa20.86■□□□□ 0.93
USHBP1-210ENST00000600286 TMC4Q7Z404 712 aa20.86■□□□□ 0.93
USHBP1-210ENST00000600286 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
USHBP1-210ENST00000600286 GRAPLQ8TC17 118 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-210ENST00000600286 BCS1LQ9Y276 419 aa20.86■□□□□ 0.93
USHBP1-210ENST00000600286 RPS8P62241 208 aaKnown RBP20.85■□□□□ 0.93
USHBP1-210ENST00000600286 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
USHBP1-210ENST00000600286 WWC3Q9ULE0 1092 aa20.85■□□□□ 0.93
USHBP1-210ENST00000600286 ITGA6P23229 1130 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 EPHA10Q5JZY3 1008 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 MPHOSPH8Q99549 860 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 GREM2Q9H772 168 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 SBF1O95248 1867 aa20.84■□□□□ 0.93
USHBP1-210ENST00000600286 CEP350Q5VT06 3117 aa20.83■□□□□ 0.93
USHBP1-210ENST00000600286 AAMPQ13685 434 aa20.83■□□□□ 0.93
USHBP1-210ENST00000600286 RABL6Q3YEC7 729 aaPredicted RBP20.83■□□□□ 0.93
USHBP1-210ENST00000600286 PRPF40BQ6NWY9 871 aaKnown RBP20.83■□□□□ 0.93
USHBP1-210ENST00000600286 PPEF1O14829 653 aaPredicted RBP20.82■□□□□ 0.92
USHBP1-210ENST00000600286 FAM161AQ3B820 660 aa20.82■□□□□ 0.92
USHBP1-210ENST00000600286 GRIPAP1Q4V328 841 aa20.82■□□□□ 0.92
USHBP1-210ENST00000600286 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
USHBP1-210ENST00000600286 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
USHBP1-210ENST00000600286 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
USHBP1-210ENST00000600286 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
USHBP1-210ENST00000600286 ANKRD44Q8N8A2 993 aa20.81■□□□□ 0.92
USHBP1-210ENST00000600286 CRBNQ96SW2 442 aa20.81■□□□□ 0.92
USHBP1-210ENST00000600286 ZBTB40Q9NUA8 1239 aa20.81■□□□□ 0.92
USHBP1-210ENST00000600286 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-210ENST00000600286 SRGAP3O43295 1099 aa20.8■□□□□ 0.92
USHBP1-210ENST00000600286 NEFLP07196 543 aa20.8■□□□□ 0.92
USHBP1-210ENST00000600286 C21orf2O43822 256 aa20.79■□□□□ 0.92
USHBP1-210ENST00000600286 RPAP2Q8IXW5 612 aaPredicted RBP20.79■□□□□ 0.92
USHBP1-210ENST00000600286 SP8Q8IXZ3 490 aa20.79■□□□□ 0.92
USHBP1-210ENST00000600286 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
USHBP1-210ENST00000600286 HMMRO75330 724 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 ATP8B2P98198 1209 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 LDHAL6AQ6ZMR3 332 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 RTKN2Q8IZC4 609 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 CNNM1Q9NRU3 951 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 BSDC1Q9NW68 430 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-210ENST00000600286 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
USHBP1-210ENST00000600286 MTX1Q13505 466 aa20.77■□□□□ 0.92
USHBP1-210ENST00000600286 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
USHBP1-210ENST00000600286 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.92
USHBP1-210ENST00000600286 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.91
USHBP1-210ENST00000600286 LAMB2P55268 1798 aa20.76■□□□□ 0.91
USHBP1-210ENST00000600286 ARHGAP27Q6ZUM4 889 aa20.75■□□□□ 0.91
USHBP1-210ENST00000600286 ANKRD2Q9GZV1 360 aa20.75■□□□□ 0.91
USHBP1-210ENST00000600286 FBXO3Q9UK99 471 aa20.75■□□□□ 0.91
USHBP1-210ENST00000600286 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
USHBP1-210ENST00000600286 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
USHBP1-210ENST00000600286 MPNDQ8N594 471 aa20.74■□□□□ 0.91
USHBP1-210ENST00000600286 C7orf43Q8WVR3 580 aa20.74■□□□□ 0.91
USHBP1-210ENST00000600286 ZNF594Q96JF6 807 aaPredicted RBP20.74■□□□□ 0.91
USHBP1-210ENST00000600286 ANKIB1Q9P2G1 1089 aa20.74■□□□□ 0.91
USHBP1-210ENST00000600286 IRX6P78412 446 aaPredicted RBP20.73■□□□□ 0.91
USHBP1-210ENST00000600286 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
USHBP1-210ENST00000600286 DPP8Q6V1X1 898 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms