RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 OSBPL3Q9H4L5 887 aa18.64■□□□□ 0.57
VRK3-218ENST00000600031 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
VRK3-218ENST00000600031 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
VRK3-218ENST00000600031 MYH3P11055 1940 aa18.63■□□□□ 0.57
VRK3-218ENST00000600031 ADRA2BP18089 450 aa18.63■□□□□ 0.57
VRK3-218ENST00000600031 MX1P20591 662 aa18.63■□□□□ 0.57
VRK3-218ENST00000600031 CCDC57Q2TAC2 916 aa18.62■□□□□ 0.57
VRK3-218ENST00000600031 CLASRPQ8N2M8 674 aaKnown RBP18.62■□□□□ 0.57
VRK3-218ENST00000600031 GREM2Q9H772 168 aa18.62■□□□□ 0.57
VRK3-218ENST00000600031 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
VRK3-218ENST00000600031 SSFA2P28290 1259 aa18.61■□□□□ 0.57
VRK3-218ENST00000600031 IFIT5Q13325 482 aaKnown RBP18.61■□□□□ 0.57
VRK3-218ENST00000600031 ATG9AQ7Z3C6 839 aa18.61■□□□□ 0.57
VRK3-218ENST00000600031 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
VRK3-218ENST00000600031 SEC24BO95487 1268 aa18.6■□□□□ 0.57
VRK3-218ENST00000600031 TFCP2Q12800 502 aa18.6■□□□□ 0.57
VRK3-218ENST00000600031 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
VRK3-218ENST00000600031 LRRC24Q50LG9 513 aa18.6■□□□□ 0.57
VRK3-218ENST00000600031 EAF2Q96CJ1 260 aaPredicted RBP18.6■□□□□ 0.57
VRK3-218ENST00000600031 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
VRK3-218ENST00000600031 EYA2O00167 538 aa18.59■□□□□ 0.57
VRK3-218ENST00000600031 ITGA6P23229 1130 aa18.59■□□□□ 0.57
VRK3-218ENST00000600031 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
VRK3-218ENST00000600031 AACSQ86V21 672 aa18.59■□□□□ 0.57
VRK3-218ENST00000600031 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
VRK3-218ENST00000600031 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
VRK3-218ENST00000600031 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
VRK3-218ENST00000600031 GSE1Q14687 1217 aa18.58■□□□□ 0.57
VRK3-218ENST00000600031 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.56
VRK3-218ENST00000600031 CIAO1O76071 339 aa18.58■□□□□ 0.56
VRK3-218ENST00000600031 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
VRK3-218ENST00000600031 SDSP20132 328 aa18.58■□□□□ 0.56
VRK3-218ENST00000600031 IL15P40933 162 aaPredicted RBP18.58■□□□□ 0.56
VRK3-218ENST00000600031 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
VRK3-218ENST00000600031 LAMB2P55268 1798 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 GYS1P13807 737 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 BECN1Q14457 450 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 TAF7LQ5H9L4 462 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 PI4K2BQ8TCG2 481 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 AOX1Q06278 1338 aa18.57■□□□□ 0.56
VRK3-218ENST00000600031 NFIXQ14938 502 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
VRK3-218ENST00000600031 TLR7Q9NYK1 1049 aaKnown RBP18.56■□□□□ 0.56
VRK3-218ENST00000600031 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 RGPD3A6NKT7 1758 aaPredicted RBP18.56■□□□□ 0.56
VRK3-218ENST00000600031 RGPD4Q7Z3J3 1758 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 HSP90B1P14625 803 aaKnown RBP18.56■□□□□ 0.56
VRK3-218ENST00000600031 TNNI3KQ59H18 835 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 FPGT-TNNI3KV9GXZ4 949 aa18.56■□□□□ 0.56
VRK3-218ENST00000600031 ABCC12Q96J65 1359 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
VRK3-218ENST00000600031 EN1Q05925 392 aaPredicted RBP18.55■□□□□ 0.56
VRK3-218ENST00000600031 EZH2Q15910 746 aaKnown RBP18.55■□□□□ 0.56
VRK3-218ENST00000600031 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
VRK3-218ENST00000600031 FBXO3Q9UK99 471 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
VRK3-218ENST00000600031 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
VRK3-218ENST00000600031 CCDC152Q4G0S7 254 aa18.54■□□□□ 0.56
VRK3-218ENST00000600031 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
VRK3-218ENST00000600031 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
VRK3-218ENST00000600031 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
VRK3-218ENST00000600031 LDHAL6AQ6ZMR3 332 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
VRK3-218ENST00000600031 CCDC24Q8N4L8 307 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 RIPOR2Q9Y4F9 1068 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 CDC45O75419 566 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
VRK3-218ENST00000600031 CARMIL3Q8ND23 1372 aa18.53■□□□□ 0.56
VRK3-218ENST00000600031 DBNLQ9UJU6 430 aaKnown RBP18.52■□□□□ 0.56
VRK3-218ENST00000600031 RTL9Q8NET4 1388 aa18.52■□□□□ 0.56
VRK3-218ENST00000600031 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.55
VRK3-218ENST00000600031 GPATCH3Q96I76 525 aa18.52■□□□□ 0.55
VRK3-218ENST00000600031 GPR108Q9NPR9 543 aa18.52■□□□□ 0.55
VRK3-218ENST00000600031 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.55
VRK3-218ENST00000600031 TRIM6-TRIM34B2RNG4 842 aa18.51■□□□□ 0.55
VRK3-218ENST00000600031 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
VRK3-218ENST00000600031 MAP4K4O95819 1239 aaPredicted RBP18.51■□□□□ 0.55
VRK3-218ENST00000600031 TM4SF1P30408 202 aa18.51■□□□□ 0.55
VRK3-218ENST00000600031 TIMM10P62072 90 aa18.51■□□□□ 0.55
VRK3-218ENST00000600031 DBNDD2Q9BQY9 259 aa18.51■□□□□ 0.55
VRK3-218ENST00000600031 CNNM1Q9NRU3 951 aa18.51■□□□□ 0.55
VRK3-218ENST00000600031 ERC2O15083 957 aa18.5■□□□□ 0.55
VRK3-218ENST00000600031 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
VRK3-218ENST00000600031 CASZ1Q86V15 1759 aa18.5■□□□□ 0.55
VRK3-218ENST00000600031 RIC1Q4ADV7 1423 aa18.5■□□□□ 0.55
VRK3-218ENST00000600031 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
VRK3-218ENST00000600031 LRP5O75197 1615 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 ZNF609O15014 1411 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 COL4A1P02462 1669 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 NPHP1O15259 732 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms