RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 JARID2Q92833 1246 aaPredicted RBP35.96■■■■□ 3.35
ZNF558-206ENST00000599938 NEURL1BA8MQ27 555 aa35.95■■■■□ 3.35
ZNF558-206ENST00000599938 DPY19L2Q6NUT2 758 aa35.95■■■■□ 3.35
ZNF558-206ENST00000599938 SLFN5Q08AF3 891 aa35.94■■■■□ 3.34
ZNF558-206ENST00000599938 RRAGCQ9HB90 399 aa35.94■■■■□ 3.34
ZNF558-206ENST00000599938 LRRC37AA6NMS7 1700 aa35.92■■■■□ 3.34
ZNF558-206ENST00000599938 CDHR2Q9BYE9 1310 aa35.92■■■■□ 3.34
ZNF558-206ENST00000599938 PDE8AO60658 829 aa35.91■■■■□ 3.34
ZNF558-206ENST00000599938 TMC4Q7Z404 712 aa35.91■■■■□ 3.34
ZNF558-206ENST00000599938 SP8Q8IXZ3 490 aa35.91■■■■□ 3.34
ZNF558-206ENST00000599938 C16orf71Q8IYS4 520 aaPredicted RBP35.91■■■■□ 3.34
ZNF558-206ENST00000599938 WDR90Q96KV7 1748 aa35.91■■■■□ 3.34
ZNF558-206ENST00000599938 COL4A1P02462 1669 aa35.91■■■■□ 3.34
ZNF558-206ENST00000599938 CELF1Q92879 486 aaKnown RBP35.9■■■■□ 3.34
ZNF558-206ENST00000599938 CDCA7LQ96GN5 454 aa35.9■■■■□ 3.34
ZNF558-206ENST00000599938 TOMM70O94826 608 aa35.89■■■■□ 3.34
ZNF558-206ENST00000599938 CCDC152Q4G0S7 254 aa35.89■■■■□ 3.34
ZNF558-206ENST00000599938 LINS1Q8NG48 757 aa35.88■■■■□ 3.33
ZNF558-206ENST00000599938 MYH3P11055 1940 aa35.88■■■■□ 3.33
ZNF558-206ENST00000599938 F6X3S4 739 aa35.87■■■■□ 3.33
ZNF558-206ENST00000599938 DPP8Q6V1X1 898 aaPredicted RBP35.87■■■■□ 3.33
ZNF558-206ENST00000599938 JDP2Q8WYK2 163 aa35.87■■■■□ 3.33
ZNF558-206ENST00000599938 COL4A5P29400 1685 aa35.87■■■■□ 3.33
ZNF558-206ENST00000599938 GCKRQ14397 625 aa35.86■■■■□ 3.33
ZNF558-206ENST00000599938 UBE3BQ7Z3V4 1068 aa35.86■■■■□ 3.33
ZNF558-206ENST00000599938 LARGE2Q8N3Y3 721 aa35.86■■■■□ 3.33
ZNF558-206ENST00000599938 ZNF541Q9H0D2 1346 aa35.85■■■■□ 3.33
ZNF558-206ENST00000599938 VEGFAP15692 232 aaPredicted RBP35.85■■■■□ 3.33
ZNF558-206ENST00000599938 CTSWP56202 376 aa35.85■■■■□ 3.33
ZNF558-206ENST00000599938 MPNDQ8N594 471 aa35.85■■■■□ 3.33
ZNF558-206ENST00000599938 SUPT20HQ8NEM7 779 aa35.85■■■■□ 3.33
ZNF558-206ENST00000599938 CCDC85AQ96PX6 553 aaPredicted RBP35.85■■■■□ 3.33
ZNF558-206ENST00000599938 DDNO94850 711 aaPredicted RBP35.84■■■■□ 3.33
ZNF558-206ENST00000599938 SEC31BQ9NQW1 1179 aa35.84■■■■□ 3.33
ZNF558-206ENST00000599938 PPIP5K2O43314 1243 aa35.83■■■■□ 3.33
ZNF558-206ENST00000599938 RTFDC1Q9BY42 306 aaPredicted RBP35.83■■■■□ 3.33
ZNF558-206ENST00000599938 DUOX1Q9NRD9 1551 aa35.82■■■■□ 3.32
ZNF558-206ENST00000599938 H7C1W4 665 aa35.81■■■■□ 3.32
ZNF558-206ENST00000599938 FZD9O00144 591 aa35.81■■■■□ 3.32
ZNF558-206ENST00000599938 RPS8P62241 208 aaKnown RBP35.81■■■■□ 3.32
ZNF558-206ENST00000599938 AOC3Q16853 763 aa35.81■■■■□ 3.32
ZNF558-206ENST00000599938 RBM46Q8TBY0 533 aaKnown RBP35.81■■■■□ 3.32
ZNF558-206ENST00000599938 BEND3Q5T5X7 828 aa35.79■■■■□ 3.32
ZNF558-206ENST00000599938 NIM1KQ8IY84 436 aa35.79■■■■□ 3.32
ZNF558-206ENST00000599938 TRMT2AQ8IZ69 625 aaKnown RBP35.79■■■■□ 3.32
ZNF558-206ENST00000599938 MRPL50Q8N5N7 158 aaKnown RBP35.79■■■■□ 3.32
ZNF558-206ENST00000599938 POTECB2RU33 542 aa35.78■■■■□ 3.32
ZNF558-206ENST00000599938 VPS33BQ9H267 617 aa35.78■■■■□ 3.32
ZNF558-206ENST00000599938 EIF6P56537 245 aaKnown RBP35.77■■■■□ 3.32
ZNF558-206ENST00000599938 SSH1Q8WYL5 1049 aa35.77■■■■□ 3.32
ZNF558-206ENST00000599938 CASP7P55210 303 aa35.76■■■■□ 3.32
ZNF558-206ENST00000599938 SLC4A10Q6U841 1118 aa35.76■■■■□ 3.32
ZNF558-206ENST00000599938 TTLL11Q8NHH1 800 aa35.76■■■■□ 3.32
ZNF558-206ENST00000599938 NSFL1CQ9UNZ2 370 aaKnown RBP35.76■■■■□ 3.32
ZNF558-206ENST00000599938 LTBP1Q14766 1721 aa35.76■■■■□ 3.31
ZNF558-206ENST00000599938 L3MBTL3Q96JM7 780 aaPredicted RBP35.75■■■■□ 3.31
ZNF558-206ENST00000599938 CDC5LQ99459 802 aaKnown RBP35.75■■■■□ 3.31
ZNF558-206ENST00000599938 BCL2L13Q9BXK5 485 aa35.75■■■■□ 3.31
ZNF558-206ENST00000599938 GREM2Q9H772 168 aa35.75■■■■□ 3.31
ZNF558-206ENST00000599938 RTL9Q8NET4 1388 aa35.75■■■■□ 3.31
ZNF558-206ENST00000599938 SCN4AP35499 1836 aa35.74■■■■□ 3.31
ZNF558-206ENST00000599938 GPSM2P81274 684 aa35.74■■■■□ 3.31
ZNF558-206ENST00000599938 ANKRD18AQ8IVF6 992 aa35.74■■■■□ 3.31
ZNF558-206ENST00000599938 PLA2G12BQ9BX93 195 aa35.74■■■■□ 3.31
ZNF558-206ENST00000599938 CEP350Q5VT06 3117 aa35.73■■■■□ 3.31
ZNF558-206ENST00000599938 IQCA1LA6NCM1 817 aa35.73■■■■□ 3.31
ZNF558-206ENST00000599938 KIAA2012Q0VF49 1180 aa35.73■■■■□ 3.31
ZNF558-206ENST00000599938 GPC2Q8N158 579 aa35.73■■■■□ 3.31
ZNF558-206ENST00000599938 SPEF2Q9C093 1822 aa35.73■■■■□ 3.31
ZNF558-206ENST00000599938 HSPA6P17066 643 aa35.72■■■■□ 3.31
ZNF558-206ENST00000599938 PTPRCP08575 1304 aa35.72■■■■□ 3.31
ZNF558-206ENST00000599938 CT47B1P0C2W7 299 aaPredicted RBP35.71■■■■□ 3.31
ZNF558-206ENST00000599938 FSTL1Q12841 308 aa35.71■■■■□ 3.31
ZNF558-206ENST00000599938 ALDH1L2Q3SY69 923 aa35.71■■■■□ 3.31
ZNF558-206ENST00000599938 SMC1BQ8NDV3 1235 aa35.71■■■■□ 3.31
ZNF558-206ENST00000599938 SMC4Q9NTJ3 1288 aa35.71■■■■□ 3.31
ZNF558-206ENST00000599938 GJA3Q9Y6H8 435 aa35.71■■■■□ 3.31
ZNF558-206ENST00000599938 SRCIN1Q9C0H9 1055 aa35.7■■■■□ 3.31
ZNF558-206ENST00000599938 C6orf229H3BNL8 230 aa35.69■■■■□ 3.3
ZNF558-206ENST00000599938 ALDH1L1O75891 902 aa35.69■■■■□ 3.3
ZNF558-206ENST00000599938 HNRNPUQ00839 825 aaKnown RBP eCLIP35.69■■■■□ 3.3
ZNF558-206ENST00000599938 GRM8O00222 908 aa35.68■■■■□ 3.3
ZNF558-206ENST00000599938 FAM161AQ3B820 660 aa35.68■■■■□ 3.3
ZNF558-206ENST00000599938 ANKIB1Q9P2G1 1089 aa35.68■■■■□ 3.3
ZNF558-206ENST00000599938 POLLQ9UGP5 575 aa35.68■■■■□ 3.3
ZNF558-206ENST00000599938 ZNRF3Q9ULT6 936 aa35.68■■■■□ 3.3
ZNF558-206ENST00000599938 WASHC4Q2M389 1173 aa35.67■■■■□ 3.3
ZNF558-206ENST00000599938 TBC1D16Q8TBP0 767 aa35.66■■■■□ 3.3
ZNF558-206ENST00000599938 PODXL2Q9NZ53 605 aa35.66■■■■□ 3.3
ZNF558-206ENST00000599938 C9orf78Q9NZ63 289 aaPredicted RBP35.66■■■■□ 3.3
ZNF558-206ENST00000599938 HACL1Q9UJ83 578 aa35.66■■■■□ 3.3
ZNF558-206ENST00000599938 UFL1O94874 794 aa35.65■■■■□ 3.3
ZNF558-206ENST00000599938 EYA3Q99504 573 aa35.65■■■■□ 3.3
ZNF558-206ENST00000599938 TAF1DQ9H5J8 278 aaPredicted RBP35.65■■■■□ 3.3
ZNF558-206ENST00000599938 ITGA6P23229 1130 aa35.64■■■■□ 3.3
ZNF558-206ENST00000599938 GGA1Q9UJY5 639 aa35.64■■■■□ 3.3
ZNF558-206ENST00000599938 RIMBP2O15034 1052 aa35.63■■■■□ 3.29
ZNF558-206ENST00000599938 CSF1RP07333 972 aa35.63■■■■□ 3.29
ZNF558-206ENST00000599938 GPR101Q96P66 508 aaPredicted RBP35.63■■■■□ 3.29
ZNF558-206ENST00000599938 XDHP47989 1333 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms