RNA–Protein interactions for RNA: ENST00000599570.5

SNRPA-207, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-207ENST00000599570 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
SNRPA-207ENST00000599570 HDAC5Q9UQL6 1122 aa17.42■□□□□ 0.38
SNRPA-207ENST00000599570 ABCC4O15439 1325 aa17.42■□□□□ 0.38
SNRPA-207ENST00000599570 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
SNRPA-207ENST00000599570 BBOX1O75936 387 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 YY1P25490 414 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 CTSWP56202 376 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 GRAPQ13588 217 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
SNRPA-207ENST00000599570 SYNE4Q8N205 404 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
SNRPA-207ENST00000599570 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
SNRPA-207ENST00000599570 GOLGB1Q14789 3259 aaKnown RBP17.41■□□□□ 0.38
SNRPA-207ENST00000599570 TAF1P21675 1872 aa17.4■□□□□ 0.38
SNRPA-207ENST00000599570 H7C1W4 665 aa17.4■□□□□ 0.38
SNRPA-207ENST00000599570 TRIM27P14373 513 aa17.4■□□□□ 0.38
SNRPA-207ENST00000599570 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
SNRPA-207ENST00000599570 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
SNRPA-207ENST00000599570 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
SNRPA-207ENST00000599570 LTBP3Q9NS15 1303 aa17.4■□□□□ 0.38
SNRPA-207ENST00000599570 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
SNRPA-207ENST00000599570 MS4A1P11836 297 aa17.39■□□□□ 0.37
SNRPA-207ENST00000599570 LMNB1P20700 586 aa17.38■□□□□ 0.37
SNRPA-207ENST00000599570 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
SNRPA-207ENST00000599570 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
SNRPA-207ENST00000599570 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
SNRPA-207ENST00000599570 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
SNRPA-207ENST00000599570 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNRPA-207ENST00000599570 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
SNRPA-207ENST00000599570 SUPT20HQ8NEM7 779 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
SNRPA-207ENST00000599570 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
SNRPA-207ENST00000599570 ZC3H4Q9UPT8 1303 aaKnown RBP17.36■□□□□ 0.37
SNRPA-207ENST00000599570 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
SNRPA-207ENST00000599570 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
SNRPA-207ENST00000599570 RASSF7Q02833 373 aa17.35■□□□□ 0.37
SNRPA-207ENST00000599570 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
SNRPA-207ENST00000599570 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
SNRPA-207ENST00000599570 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
SNRPA-207ENST00000599570 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
SNRPA-207ENST00000599570 PSMD1Q99460 953 aa17.35■□□□□ 0.37
SNRPA-207ENST00000599570 NFKBIEO00221 500 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 UTYO14607 1347 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 CASP7P55210 303 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 TAF7LQ5H9L4 462 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 DPP8Q6V1X1 898 aaPredicted RBP17.34■□□□□ 0.37
SNRPA-207ENST00000599570 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
SNRPA-207ENST00000599570 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
SNRPA-207ENST00000599570 SBF1O95248 1867 aa17.33■□□□□ 0.37
SNRPA-207ENST00000599570 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
SNRPA-207ENST00000599570 GNAI3P08754 354 aa17.33■□□□□ 0.36
SNRPA-207ENST00000599570 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.36
SNRPA-207ENST00000599570 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
SNRPA-207ENST00000599570 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
SNRPA-207ENST00000599570 DICER1Q9UPY3 1922 aaKnown RBP17.32■□□□□ 0.36
SNRPA-207ENST00000599570 ITGA6P23229 1130 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 MPNDQ8N594 471 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 TMEM57Q8N5G2 664 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
SNRPA-207ENST00000599570 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 GREM2Q9H772 168 aa17.32■□□□□ 0.36
SNRPA-207ENST00000599570 CSF1RP07333 972 aa17.31■□□□□ 0.36
SNRPA-207ENST00000599570 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
SNRPA-207ENST00000599570 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SNRPA-207ENST00000599570 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
SNRPA-207ENST00000599570 VPS33BQ9H267 617 aa17.31■□□□□ 0.36
SNRPA-207ENST00000599570 PLIN1O60240 522 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 LMBR1LQ6UX01 489 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 EYA3Q99504 573 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 ANKIB1Q9P2G1 1089 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 UTRNP46939 3433 aa17.3■□□□□ 0.36
SNRPA-207ENST00000599570 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
SNRPA-207ENST00000599570 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
SNRPA-207ENST00000599570 RRP1P56182 461 aaKnown RBP17.29■□□□□ 0.36
SNRPA-207ENST00000599570 FOXO4P98177 505 aa17.29■□□□□ 0.36
SNRPA-207ENST00000599570 PANK1Q8TE04 598 aa17.29■□□□□ 0.36
SNRPA-207ENST00000599570 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
SNRPA-207ENST00000599570 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
SNRPA-207ENST00000599570 NSFL1CQ9UNZ2 370 aaKnown RBP17.29■□□□□ 0.36
SNRPA-207ENST00000599570 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
SNRPA-207ENST00000599570 XDHP47989 1333 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 RLBP1P12271 317 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 MEIS3Q99687 375 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
SNRPA-207ENST00000599570 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
SNRPA-207ENST00000599570 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
SNRPA-207ENST00000599570 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
SNRPA-207ENST00000599570 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms