RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCN8A-208ENST00000599343 DAPK1P53355 1430 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 PDE4BQ07343 736 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCN8A-208ENST00000599343 AMOTQ4VCS5 1084 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 SLF2Q8IX21 1173 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 BRF1Q92994 677 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 GJC1P36383 396 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC174Q6PII3 467 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 USP48Q86UV5 1035 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 TBC1D5Q92609 795 aa13.52□□□□□ -0.24
SCN8A-208ENST00000599343 LDHAL6AQ6ZMR3 332 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
SCN8A-208ENST00000599343 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 TMEM110-MUSTN1A8MSY1 372 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 STAT6P42226 847 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 SYNCQ9H7C4 482 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 RMND1Q9NWS8 449 aa13.52□□□□□ -0.25
SCN8A-208ENST00000599343 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 KRT13P13646 458 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 CYLC1P35663 651 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 DNAJC25Q9H1X3 360 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 PABPN1LA6NDY0 278 aaKnown RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 KIF4AO95239 1232 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 MARCKSP29966 332 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 TMEM87AQ8NBN3 555 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 CCDC160A6NGH7 325 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 ARL1P40616 181 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 CAPZA3Q96KX2 299 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 ALG1Q9BT22 464 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 IQCGQ9H095 443 aaKnown RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
SCN8A-208ENST00000599343 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
SCN8A-208ENST00000599343 ARID5AQ03989 594 aa13.5□□□□□ -0.25
SCN8A-208ENST00000599343 FERMT1Q9BQL6 677 aa13.5□□□□□ -0.25
SCN8A-208ENST00000599343 WTAPQ15007 396 aa13.5□□□□□ -0.25
SCN8A-208ENST00000599343 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
SCN8A-208ENST00000599343 ZNF354CQ86Y25 554 aa13.5□□□□□ -0.25
SCN8A-208ENST00000599343 MRVI1Q9Y6F6 885 aa13.5□□□□□ -0.25
SCN8A-208ENST00000599343 LRRC27Q9C0I9 530 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 SMIM23A6NLE4 172 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 ANXA1P04083 346 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 SYT1P21579 422 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 MICALL1Q8N3F8 863 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 RASAL2Q9UJF2 1139 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 SDSP20132 328 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
SCN8A-208ENST00000599343 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
SCN8A-208ENST00000599343 CABP5Q9NP86 173 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 CAVIN2O95810 425 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 CCDC63Q8NA47 563 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 DACT1Q9NYF0 836 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 BAG3O95817 575 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
SCN8A-208ENST00000599343 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
SCN8A-208ENST00000599343 ZBTB43O43298 467 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 KARSQ15046 597 aaKnown RBP13.48□□□□□ -0.25
SCN8A-208ENST00000599343 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 Q6ZUG5 572 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 SSX2IPQ9Y2D8 614 aa13.48□□□□□ -0.25
SCN8A-208ENST00000599343 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 IVLP07476 585 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 DNM1Q05193 864 aaKnown RBP13.47□□□□□ -0.25
SCN8A-208ENST00000599343 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
SCN8A-208ENST00000599343 IFIT1BQ5T764 474 aaKnown RBP13.47□□□□□ -0.25
SCN8A-208ENST00000599343 OPA1O60313 960 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 SREK1Q8WXA9 508 aaKnown RBP13.47□□□□□ -0.25
SCN8A-208ENST00000599343 DHX58Q96C10 678 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 NAIPQ13075 1403 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 TACC1O75410 805 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 ASIC1P78348 528 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
SCN8A-208ENST00000599343 PHACTR2O75167 634 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms