RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 A0A087WZG4 1122 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 HSP90AB1P08238 724 aaKnown RBP6.2□□□□□ -1.42
HERC3-213ENST00000598772 CYP19A1P11511 503 aaPredicted RBP6.2□□□□□ -1.42
HERC3-213ENST00000598772 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
HERC3-213ENST00000598772 ALDH1B1P30837 517 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 AOC3Q16853 763 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 MOB2Q70IA6 237 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 NUTM1Q86Y26 1132 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 SYMPKQ92797 1274 aaKnown RBP6.2□□□□□ -1.42
HERC3-213ENST00000598772 ARMC5Q96C12 935 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 GGNBP2Q9H3C7 697 aa6.2□□□□□ -1.42
HERC3-213ENST00000598772 NPC1L1Q9UHC9 1359 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 EDC4Q6P2E9 1401 aaKnown RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 TNFRSF10AO00220 468 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 ZBTB7BO15156 539 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 TNNT2P45379 298 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 ZNF530Q6P9A1 599 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 ALYREFQ86V81 257 aaKnown RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 MICALL2Q8IY33 904 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 PSMD1Q99460 953 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 HTATIP2Q9BUP3 242 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 TMX4Q9H1E5 349 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 PRO3102Q9H379 93 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.19□□□□□ -1.42
HERC3-213ENST00000598772 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 ANKRD31Q8N7Z5 1873 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 WASHC2AQ641Q2 1341 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 RPTORQ8N122 1335 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 IRS2Q9Y4H2 1338 aa6.19□□□□□ -1.42
HERC3-213ENST00000598772 COL11A2P13942 1736 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 COL5A3P25940 1745 aaPredicted RBP6.19□□□□□ -1.42
HERC3-213ENST00000598772 A0A1W2PPC1 479 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 EVI5O60447 810 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 TM4SF4P48230 202 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 SREBF2Q12772 1141 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 SLC39A6Q13433 755 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 TNIP1Q15025 636 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 CDCA5Q96FF9 252 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 ZNF333Q96JL9 665 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 EYA1Q99502 592 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
HERC3-213ENST00000598772 HTTP42858 3142 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 NRXN2Q9P2S2 1712 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 BCAMP50895 628 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 PLEKHO1Q53GL0 409 aaPredicted RBP6.17□□□□□ -1.42
HERC3-213ENST00000598772 NOM1Q5C9Z4 860 aaKnown RBP6.17□□□□□ -1.42
HERC3-213ENST00000598772 C1orf141Q5JVX7 400 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 SH3TC2Q8TF17 1288 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 LAMA3Q16787 3333 aa6.17□□□□□ -1.42
HERC3-213ENST00000598772 POLR2AP24928 1970 aaKnown RBP6.17□□□□□ -1.42
HERC3-213ENST00000598772 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 SLC24A1O60721 1099 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 STARD3NLO95772 234 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 ATXN8OSP0DMR3 200 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 PRKG1Q13976 671 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 PRAMEF18Q5VWM3 479 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 GPR153Q6NV75 609 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 TPTE2Q6XPS3 522 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 SLC51AQ86UW1 340 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 RPGRQ92834 1020 aaKnown RBP6.16□□□□□ -1.42
HERC3-213ENST00000598772 FOXD4L1Q9NU39 408 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 SCAF8Q9UPN6 1271 aaKnown RBP6.16□□□□□ -1.42
HERC3-213ENST00000598772 EMILIN1Q9Y6C2 1016 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 PTCH2Q9Y6C5 1203 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
HERC3-213ENST00000598772 COL4A5P29400 1685 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 A0A1W2PP64 1363 aa6.16□□□□□ -1.42
HERC3-213ENST00000598772 CACNA1GO43497 2377 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 PPEF1O14829 653 aaPredicted RBP6.15□□□□□ -1.42
HERC3-213ENST00000598772 ALDH1A1P00352 501 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 EGFRP00533 1210 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 EIF5P55010 431 aaKnown RBP6.15□□□□□ -1.42
HERC3-213ENST00000598772 TCIRG1Q13488 830 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 CC2D2BQ6DHV5 1058 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 MAFAQ8NHW3 353 aaPredicted RBP6.15□□□□□ -1.42
HERC3-213ENST00000598772 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 GGA3Q9NZ52 723 aa6.15□□□□□ -1.42
HERC3-213ENST00000598772 ZMYND8Q9ULU4 1186 aaPredicted RBP6.15□□□□□ -1.42
HERC3-213ENST00000598772 FLT4P35916 1363 aa6.15□□□□□ -1.43
HERC3-213ENST00000598772 PRUNE2Q8WUY3 3088 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 ATN1P54259 1190 aaPredicted RBP6.14□□□□□ -1.43
HERC3-213ENST00000598772 SP3Q02447 781 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 MARVELD3Q96A59 401 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 MS4A3Q96HJ5 214 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 GUCD1Q96NT3 240 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 BIN2Q9UBW5 565 aaPredicted RBP6.14□□□□□ -1.43
HERC3-213ENST00000598772 HCN4Q9Y3Q4 1203 aa6.14□□□□□ -1.43
HERC3-213ENST00000598772 ASTN2O75129 1339 aaPredicted RBP6.14□□□□□ -1.43
HERC3-213ENST00000598772 PIEZO1Q92508 2521 aa6.13□□□□□ -1.43
HERC3-213ENST00000598772 FYB1O15117 783 aa6.13□□□□□ -1.43
HERC3-213ENST00000598772 ARHGEF6Q15052 776 aa6.13□□□□□ -1.43
HERC3-213ENST00000598772 MTFR1Q15390 333 aa6.13□□□□□ -1.43
HERC3-213ENST00000598772 NIP7Q9Y221 180 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERC3-213ENST00000598772 FARP2O94887 1054 aaPredicted RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 CAMTA2O94983 1202 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 A1BGP04217 495 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 SYN1P17600 705 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms