RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TAF1DQ9H5J8 278 aaPredicted RBP29.6■■■□□ 2.33
SSBP4-205ENST00000598159 SALL2Q9Y467 1007 aaPredicted RBP29.6■■■□□ 2.33
SSBP4-205ENST00000598159 CHADLQ6NUI6 762 aa29.59■■■□□ 2.33
SSBP4-205ENST00000598159 DPP8Q6V1X1 898 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-205ENST00000598159 KSR2Q6VAB6 950 aa29.59■■■□□ 2.33
SSBP4-205ENST00000598159 SLC51AQ86UW1 340 aa29.59■■■□□ 2.33
SSBP4-205ENST00000598159 HACL1Q9UJ83 578 aa29.59■■■□□ 2.33
SSBP4-205ENST00000598159 DDX60Q8IY21 1712 aaKnown RBP29.59■■■□□ 2.33
SSBP4-205ENST00000598159 PPIP5K2O43314 1243 aa29.58■■■□□ 2.33
SSBP4-205ENST00000598159 NIM1KQ8IY84 436 aa29.58■■■□□ 2.33
SSBP4-205ENST00000598159 FAM9BQ8IZU0 186 aa29.58■■■□□ 2.33
SSBP4-205ENST00000598159 CWC25Q9NXE8 425 aaPredicted RBP29.57■■■□□ 2.32
SSBP4-205ENST00000598159 MAP3K2Q9Y2U5 619 aa29.57■■■□□ 2.32
SSBP4-205ENST00000598159 SLC4A2P04920 1241 aa29.56■■■□□ 2.32
SSBP4-205ENST00000598159 PCCAP05165 728 aaPredicted RBP29.56■■■□□ 2.32
SSBP4-205ENST00000598159 TAF1P21675 1872 aa29.56■■■□□ 2.32
SSBP4-205ENST00000598159 PI4KAP2A4QPH2 592 aa29.55■■■□□ 2.32
SSBP4-205ENST00000598159 HTRA3P83110 453 aa29.55■■■□□ 2.32
SSBP4-205ENST00000598159 AOC3Q16853 763 aa29.55■■■□□ 2.32
SSBP4-205ENST00000598159 LDHDQ86WU2 507 aa29.55■■■□□ 2.32
SSBP4-205ENST00000598159 PI4KAP1Q8N8J0 262 aa29.55■■■□□ 2.32
SSBP4-205ENST00000598159 POTEIP0CG38 1075 aa29.54■■■□□ 2.32
SSBP4-205ENST00000598159 POTEJP0CG39 1038 aa29.54■■■□□ 2.32
SSBP4-205ENST00000598159 EPHX2P34913 555 aa29.54■■■□□ 2.32
SSBP4-205ENST00000598159 PNMA8AQ86V59 439 aaPredicted RBP29.54■■■□□ 2.32
SSBP4-205ENST00000598159 GJA3Q9Y6H8 435 aa29.54■■■□□ 2.32
SSBP4-205ENST00000598159 FANCIQ9NVI1 1328 aa29.53■■■□□ 2.32
SSBP4-205ENST00000598159 CELF1Q92879 486 aaKnown RBP29.53■■■□□ 2.32
SSBP4-205ENST00000598159 COL4A5P29400 1685 aa29.53■■■□□ 2.32
SSBP4-205ENST00000598159 PDE8AO60658 829 aa29.52■■■□□ 2.32
SSBP4-205ENST00000598159 RPS8P62241 208 aaKnown RBP29.52■■■□□ 2.32
SSBP4-205ENST00000598159 NEXNQ0ZGT2 675 aa29.52■■■□□ 2.32
SSBP4-205ENST00000598159 KLRG1Q96E93 195 aa29.52■■■□□ 2.32
SSBP4-205ENST00000598159 ZNRF3Q9ULT6 936 aa29.52■■■□□ 2.32
SSBP4-205ENST00000598159 VAMP4O75379 141 aa29.51■■■□□ 2.31
SSBP4-205ENST00000598159 KIAA2012Q0VF49 1180 aa29.51■■■□□ 2.31
SSBP4-205ENST00000598159 EAPPQ56P03 285 aaPredicted RBP29.51■■■□□ 2.31
SSBP4-205ENST00000598159 CACNA1FO60840 1977 aa29.5■■■□□ 2.31
SSBP4-205ENST00000598159 LMOD1P29536 600 aaPredicted RBP29.49■■■□□ 2.31
SSBP4-205ENST00000598159 CCDC152Q4G0S7 254 aa29.49■■■□□ 2.31
SSBP4-205ENST00000598159 G2E3Q7L622 706 aa29.49■■■□□ 2.31
SSBP4-205ENST00000598159 NSFL1CQ9UNZ2 370 aaKnown RBP29.49■■■□□ 2.31
SSBP4-205ENST00000598159 CLEC11AQ9Y240 323 aa29.49■■■□□ 2.31
SSBP4-205ENST00000598159 IGKV5-2P06315 115 aa29.48■■■□□ 2.31
SSBP4-205ENST00000598159 EXOSC9Q06265 439 aaKnown RBP29.48■■■□□ 2.31
SSBP4-205ENST00000598159 CDHR2Q9BYE9 1310 aa29.47■■■□□ 2.31
SSBP4-205ENST00000598159 JARID2Q92833 1246 aaPredicted RBP29.47■■■□□ 2.31
SSBP4-205ENST00000598159 MYH16Q9H6N6 1097 aa29.47■■■□□ 2.31
SSBP4-205ENST00000598159 CXCL9Q07325 125 aa29.46■■■□□ 2.31
SSBP4-205ENST00000598159 FLIIQ13045 1269 aa29.46■■■□□ 2.31
SSBP4-205ENST00000598159 SCNN1DP51172 638 aa29.45■■■□□ 2.31
SSBP4-205ENST00000598159 WASHC4Q2M389 1173 aa29.45■■■□□ 2.31
SSBP4-205ENST00000598159 SEC31BQ9NQW1 1179 aa29.45■■■□□ 2.31
SSBP4-205ENST00000598159 JMYQ8N9B5 988 aa29.44■■■□□ 2.3
SSBP4-205ENST00000598159 SPINK5Q9NQ38 1064 aaPredicted RBP29.44■■■□□ 2.3
SSBP4-205ENST00000598159 LRRC37AA6NMS7 1700 aa29.44■■■□□ 2.3
SSBP4-205ENST00000598159 NEURL1BA8MQ27 555 aa29.43■■■□□ 2.3
SSBP4-205ENST00000598159 EPS15P42566 896 aa29.43■■■□□ 2.3
SSBP4-205ENST00000598159 GPSM2P81274 684 aa29.43■■■□□ 2.3
SSBP4-205ENST00000598159 TNIP1Q15025 636 aa29.43■■■□□ 2.3
SSBP4-205ENST00000598159 CIAPIN1Q6FI81 312 aa29.43■■■□□ 2.3
SSBP4-205ENST00000598159 C6orf229H3BNL8 230 aa29.42■■■□□ 2.3
SSBP4-205ENST00000598159 ITGBL1O95965 494 aaPredicted RBP29.42■■■□□ 2.3
SSBP4-205ENST00000598159 FKBP5Q13451 457 aaPredicted RBP29.42■■■□□ 2.3
SSBP4-205ENST00000598159 CWF19L2Q2TBE0 894 aaKnown RBP29.42■■■□□ 2.3
SSBP4-205ENST00000598159 EYA3Q99504 573 aa29.42■■■□□ 2.3
SSBP4-205ENST00000598159 CREBZFQ9NS37 354 aa29.42■■■□□ 2.3
SSBP4-205ENST00000598159 POLLQ9UGP5 575 aa29.42■■■□□ 2.3
SSBP4-205ENST00000598159 PASKQ96RG2 1323 aa29.42■■■□□ 2.3
SSBP4-205ENST00000598159 H7C1W4 665 aa29.41■■■□□ 2.3
SSBP4-205ENST00000598159 USP50Q70EL3 339 aaPredicted RBP29.41■■■□□ 2.3
SSBP4-205ENST00000598159 DNAAF4Q8WXU2 420 aa29.41■■■□□ 2.3
SSBP4-205ENST00000598159 CNTROBQ8N137 903 aa29.4■■■□□ 2.3
SSBP4-205ENST00000598159 PODXL2Q9NZ53 605 aa29.4■■■□□ 2.3
SSBP4-205ENST00000598159 GPRC5DQ9NZD1 345 aa29.4■■■□□ 2.3
SSBP4-205ENST00000598159 ADAMTSL1Q8N6G6 1762 aa29.39■■■□□ 2.3
SSBP4-205ENST00000598159 ANKRD18AQ8IVF6 992 aa29.39■■■□□ 2.3
SSBP4-205ENST00000598159 DUOX1Q9NRD9 1551 aa29.39■■■□□ 2.29
SSBP4-205ENST00000598159 CTSWP56202 376 aa29.38■■■□□ 2.29
SSBP4-205ENST00000598159 GCKRQ14397 625 aa29.38■■■□□ 2.29
SSBP4-205ENST00000598159 TTLL11Q8NHH1 800 aa29.38■■■□□ 2.29
SSBP4-205ENST00000598159 TBC1D16Q8TBP0 767 aa29.38■■■□□ 2.29
SSBP4-205ENST00000598159 CCDC85AQ96PX6 553 aaPredicted RBP29.38■■■□□ 2.29
SSBP4-205ENST00000598159 YDJCA8MPS7 323 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 RIMBP2O15034 1052 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 RAD17O75943 681 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 MAP1SQ66K74 1059 aaPredicted RBP29.37■■■□□ 2.29
SSBP4-205ENST00000598159 LINS1Q8NG48 757 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 CDC5LQ99459 802 aaKnown RBP29.37■■■□□ 2.29
SSBP4-205ENST00000598159 ADARB2Q9NS39 739 aaKnown RBP29.37■■■□□ 2.29
SSBP4-205ENST00000598159 ANKIB1Q9P2G1 1089 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 COL4A1P02462 1669 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 LTBP1Q14766 1721 aa29.37■■■□□ 2.29
SSBP4-205ENST00000598159 BCL2L13Q9BXK5 485 aa29.36■■■□□ 2.29
SSBP4-205ENST00000598159 ZC3H12CQ9C0D7 883 aaKnown RBP29.36■■■□□ 2.29
SSBP4-205ENST00000598159 GMPSP49915 693 aaPredicted RBP29.35■■■□□ 2.29
SSBP4-205ENST00000598159 UBE3BQ7Z3V4 1068 aa29.35■■■□□ 2.29
SSBP4-205ENST00000598159 ZNF521Q96K83 1311 aa29.35■■■□□ 2.29
SSBP4-205ENST00000598159 TMEM88BA6NKF7 163 aa29.34■■■□□ 2.29
SSBP4-205ENST00000598159 PLA2G12BQ9BX93 195 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms