RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 CHD4Q14839 1912 aa21.21■□□□□ 0.99
CAPN12-206ENST00000597354 GRM8O00222 908 aa21.2■□□□□ 0.98
CAPN12-206ENST00000597354 COL4A1P02462 1669 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 NFKBIEO00221 500 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 YY1P25490 414 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 CTSWP56202 376 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 GRAPQ13588 217 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 CCDC152Q4G0S7 254 aa21.19■□□□□ 0.98
CAPN12-206ENST00000597354 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
CAPN12-206ENST00000597354 CELF1Q92879 486 aaKnown RBP21.19■□□□□ 0.98
CAPN12-206ENST00000597354 CCDC93Q567U6 631 aa21.18■□□□□ 0.98
CAPN12-206ENST00000597354 CLUAP1Q96AJ1 413 aa21.18■□□□□ 0.98
CAPN12-206ENST00000597354 IPO8O15397 1037 aaKnown RBP21.17■□□□□ 0.98
CAPN12-206ENST00000597354 NBPF7P0C2Y1 421 aaPredicted RBP21.17■□□□□ 0.98
CAPN12-206ENST00000597354 PRELPP51888 382 aa21.17■□□□□ 0.98
CAPN12-206ENST00000597354 TTLL11Q8NHH1 800 aa21.17■□□□□ 0.98
CAPN12-206ENST00000597354 ARHGAP45Q92619 1136 aa21.17■□□□□ 0.98
CAPN12-206ENST00000597354 BBOX1O75936 387 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 TRIM27P14373 513 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 EPHA10Q5JZY3 1008 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 SOGA3Q5TF21 947 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 C9orf131Q5VYM1 1079 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 PLA2G12BQ9BX93 195 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 GREM2Q9H772 168 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 MYH3P11055 1940 aa21.16■□□□□ 0.98
CAPN12-206ENST00000597354 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
CAPN12-206ENST00000597354 FOXO4P98177 505 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 ZKSCAN2Q63HK3 967 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 RNF181Q9P0P0 153 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 FER1L6Q2WGJ9 1857 aa21.15■□□□□ 0.98
CAPN12-206ENST00000597354 RPS8P62241 208 aaKnown RBP21.14■□□□□ 0.97
CAPN12-206ENST00000597354 USP44Q9H0E7 712 aa21.14■□□□□ 0.97
CAPN12-206ENST00000597354 TAOK3Q9H2K8 898 aa21.14■□□□□ 0.97
CAPN12-206ENST00000597354 RCAN3Q9UKA8 241 aa21.14■□□□□ 0.97
CAPN12-206ENST00000597354 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.97
CAPN12-206ENST00000597354 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
CAPN12-206ENST00000597354 SP8Q8IXZ3 490 aa21.13■□□□□ 0.97
CAPN12-206ENST00000597354 RTKN2Q8IZC4 609 aa21.13■□□□□ 0.97
CAPN12-206ENST00000597354 TMX4Q9H1E5 349 aaPredicted RBP21.13■□□□□ 0.97
CAPN12-206ENST00000597354 SBF1O95248 1867 aa21.13■□□□□ 0.97
CAPN12-206ENST00000597354 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
CAPN12-206ENST00000597354 CSF1RP07333 972 aa21.12■□□□□ 0.97
CAPN12-206ENST00000597354 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
CAPN12-206ENST00000597354 KAZALD1Q96I82 304 aa21.12■□□□□ 0.97
CAPN12-206ENST00000597354 ZNF277Q9NRM2 450 aaPredicted RBP21.12■□□□□ 0.97
CAPN12-206ENST00000597354 UTYO14607 1347 aa21.11■□□□□ 0.97
CAPN12-206ENST00000597354 LMNB1P20700 586 aa21.11■□□□□ 0.97
CAPN12-206ENST00000597354 ITGA6P23229 1130 aa21.11■□□□□ 0.97
CAPN12-206ENST00000597354 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
CAPN12-206ENST00000597354 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
CAPN12-206ENST00000597354 ANKRD18AQ8IVF6 992 aa21.11■□□□□ 0.97
CAPN12-206ENST00000597354 INTS3Q68E01 1043 aaKnown RBP21.1■□□□□ 0.97
CAPN12-206ENST00000597354 TMEM57Q8N5G2 664 aa21.1■□□□□ 0.97
CAPN12-206ENST00000597354 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
CAPN12-206ENST00000597354 SNED1Q8TER0 1413 aa21.1■□□□□ 0.97
CAPN12-206ENST00000597354 SPEF2Q9C093 1822 aa21.09■□□□□ 0.97
CAPN12-206ENST00000597354 PLIN1O60240 522 aa21.09■□□□□ 0.97
CAPN12-206ENST00000597354 MPNDQ8N594 471 aa21.09■□□□□ 0.97
CAPN12-206ENST00000597354 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
CAPN12-206ENST00000597354 LTBP3Q9NS15 1303 aa21.08■□□□□ 0.97
CAPN12-206ENST00000597354 RLBP1P12271 317 aa21.08■□□□□ 0.97
CAPN12-206ENST00000597354 GPSM2P81274 684 aa21.08■□□□□ 0.97
CAPN12-206ENST00000597354 DPP8Q6V1X1 898 aaPredicted RBP21.08■□□□□ 0.97
CAPN12-206ENST00000597354 TMC4Q7Z404 712 aa21.08■□□□□ 0.97
CAPN12-206ENST00000597354 FTSJ3Q8IY81 847 aaKnown RBP21.08■□□□□ 0.97
CAPN12-206ENST00000597354 DZIP1LQ8IYY4 767 aaKnown RBP21.08■□□□□ 0.97
CAPN12-206ENST00000597354 ZNF526Q8TF50 670 aaPredicted RBP21.08■□□□□ 0.97
CAPN12-206ENST00000597354 MEIS3Q99687 375 aa21.08■□□□□ 0.97
CAPN12-206ENST00000597354 NSFL1CQ9UNZ2 370 aaKnown RBP21.08■□□□□ 0.97
CAPN12-206ENST00000597354 RTL9Q8NET4 1388 aa21.08■□□□□ 0.96
CAPN12-206ENST00000597354 ANKRD18BA2A2Z9 1011 aa21.07■□□□□ 0.96
CAPN12-206ENST00000597354 UBTFL1P0CB47 393 aaPredicted RBP21.07■□□□□ 0.96
CAPN12-206ENST00000597354 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
CAPN12-206ENST00000597354 IGHMBP2P38935 993 aaKnown RBP21.06■□□□□ 0.96
CAPN12-206ENST00000597354 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
CAPN12-206ENST00000597354 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
CAPN12-206ENST00000597354 ZNF594Q96JF6 807 aaPredicted RBP21.06■□□□□ 0.96
CAPN12-206ENST00000597354 PSMD1Q99460 953 aa21.06■□□□□ 0.96
CAPN12-206ENST00000597354 LRRC37AA6NMS7 1700 aa21.05■□□□□ 0.96
CAPN12-206ENST00000597354 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
CAPN12-206ENST00000597354 CCDC57Q2TAC2 916 aa21.05■□□□□ 0.96
CAPN12-206ENST00000597354 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
CAPN12-206ENST00000597354 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
CAPN12-206ENST00000597354 TAF7LQ5H9L4 462 aa21.04■□□□□ 0.96
CAPN12-206ENST00000597354 ITPRIPQ8IWB1 547 aa21.04■□□□□ 0.96
CAPN12-206ENST00000597354 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
CAPN12-206ENST00000597354 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
CAPN12-206ENST00000597354 BSDC1Q9NW68 430 aaPredicted RBP21.04■□□□□ 0.96
CAPN12-206ENST00000597354 ANKIB1Q9P2G1 1089 aa21.04■□□□□ 0.96
CAPN12-206ENST00000597354 LRRFIP2Q9Y608 721 aaKnown RBP21.04■□□□□ 0.96
CAPN12-206ENST00000597354 C6orf229H3BNL8 230 aa21.03■□□□□ 0.96
CAPN12-206ENST00000597354 AOC3Q16853 763 aa21.03■□□□□ 0.96
CAPN12-206ENST00000597354 TIAM2Q8IVF5 1701 aa21.02■□□□□ 0.96
CAPN12-206ENST00000597354 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
CAPN12-206ENST00000597354 RABL6Q3YEC7 729 aaPredicted RBP21.02■□□□□ 0.96
CAPN12-206ENST00000597354 LARGE2Q8N3Y3 721 aa21.02■□□□□ 0.96
CAPN12-206ENST00000597354 POLLQ9UGP5 575 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms