RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 LTBP3Q9NS15 1303 aa22.96■■□□□ 1.27
IRF3-216ENST00000597180 COL4A1P02462 1669 aa22.96■■□□□ 1.27
IRF3-216ENST00000597180 PPEF1O14829 653 aaPredicted RBP22.95■■□□□ 1.26
IRF3-216ENST00000597180 GRAPQ13588 217 aa22.95■■□□□ 1.26
IRF3-216ENST00000597180 CCDC93Q567U6 631 aa22.95■■□□□ 1.26
IRF3-216ENST00000597180 GRAPLQ8TC17 118 aaPredicted RBP22.95■■□□□ 1.26
IRF3-216ENST00000597180 ARHGAP45Q92619 1136 aa22.95■■□□□ 1.26
IRF3-216ENST00000597180 GRM8O00222 908 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 BBOX1O75936 387 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 CTSWP56202 376 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 RASSF7Q02833 373 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 CC2D2BQ6DHV5 1058 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
IRF3-216ENST00000597180 CCDC152Q4G0S7 254 aa22.93■■□□□ 1.26
IRF3-216ENST00000597180 OLFM4Q6UX06 510 aa22.93■■□□□ 1.26
IRF3-216ENST00000597180 API5Q9BZZ5 524 aaKnown RBP22.93■■□□□ 1.26
IRF3-216ENST00000597180 SPEF2Q9C093 1822 aa22.93■■□□□ 1.26
IRF3-216ENST00000597180 RTL9Q8NET4 1388 aa22.92■■□□□ 1.26
IRF3-216ENST00000597180 BCAR3O75815 825 aa22.92■■□□□ 1.26
IRF3-216ENST00000597180 RTKN2Q8IZC4 609 aa22.92■■□□□ 1.26
IRF3-216ENST00000597180 TAOK3Q9H2K8 898 aa22.92■■□□□ 1.26
IRF3-216ENST00000597180 ATP6V0A2Q9Y487 856 aa22.92■■□□□ 1.26
IRF3-216ENST00000597180 UTYO14607 1347 aa22.91■■□□□ 1.26
IRF3-216ENST00000597180 PRELPP51888 382 aa22.91■■□□□ 1.26
IRF3-216ENST00000597180 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
IRF3-216ENST00000597180 TMC4Q7Z404 712 aa22.91■■□□□ 1.26
IRF3-216ENST00000597180 TTLL11Q8NHH1 800 aa22.91■■□□□ 1.26
IRF3-216ENST00000597180 LMNB1P20700 586 aa22.9■■□□□ 1.26
IRF3-216ENST00000597180 C9orf131Q5VYM1 1079 aa22.9■■□□□ 1.26
IRF3-216ENST00000597180 SP8Q8IXZ3 490 aa22.9■■□□□ 1.26
IRF3-216ENST00000597180 CELF1Q92879 486 aaKnown RBP22.9■■□□□ 1.26
IRF3-216ENST00000597180 C9orf78Q9NZ63 289 aaPredicted RBP22.9■■□□□ 1.26
IRF3-216ENST00000597180 IPO8O15397 1037 aaKnown RBP22.89■■□□□ 1.25
IRF3-216ENST00000597180 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.25
IRF3-216ENST00000597180 FKBP4Q02790 459 aaKnown RBP eCLIP22.89■■□□□ 1.25
IRF3-216ENST00000597180 SEC31BQ9NQW1 1179 aa22.89■■□□□ 1.25
IRF3-216ENST00000597180 LTBP1Q14766 1721 aa22.88■■□□□ 1.25
IRF3-216ENST00000597180 CSF1RP07333 972 aa22.88■■□□□ 1.25
IRF3-216ENST00000597180 SLC51AQ86UW1 340 aa22.88■■□□□ 1.25
IRF3-216ENST00000597180 PSMD1Q99460 953 aa22.88■■□□□ 1.25
IRF3-216ENST00000597180 RNF181Q9P0P0 153 aa22.88■■□□□ 1.25
IRF3-216ENST00000597180 RPS8P62241 208 aaKnown RBP22.87■■□□□ 1.25
IRF3-216ENST00000597180 FOXO4P98177 505 aa22.87■■□□□ 1.25
IRF3-216ENST00000597180 CCDC85AQ96PX6 553 aaPredicted RBP22.87■■□□□ 1.25
IRF3-216ENST00000597180 GREM2Q9H772 168 aa22.87■■□□□ 1.25
IRF3-216ENST00000597180 NBPF7P0C2Y1 421 aaPredicted RBP22.86■■□□□ 1.25
IRF3-216ENST00000597180 TRIM27P14373 513 aa22.86■■□□□ 1.25
IRF3-216ENST00000597180 ATF7IPQ6VMQ6 1270 aa22.86■■□□□ 1.25
IRF3-216ENST00000597180 TMX4Q9H1E5 349 aaPredicted RBP22.86■■□□□ 1.25
IRF3-216ENST00000597180 ZC3H4Q9UPT8 1303 aaKnown RBP22.85■■□□□ 1.25
IRF3-216ENST00000597180 FRAT1Q92837 279 aaPredicted RBP22.85■■□□□ 1.25
IRF3-216ENST00000597180 CDC5LQ99459 802 aaKnown RBP22.85■■□□□ 1.25
IRF3-216ENST00000597180 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
IRF3-216ENST00000597180 DUOX1Q9NRD9 1551 aa22.84■■□□□ 1.25
IRF3-216ENST00000597180 EPHA10Q5JZY3 1008 aa22.84■■□□□ 1.25
IRF3-216ENST00000597180 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
IRF3-216ENST00000597180 INTS3Q68E01 1043 aaKnown RBP22.84■■□□□ 1.25
IRF3-216ENST00000597180 FAM161AQ3B820 660 aa22.83■■□□□ 1.25
IRF3-216ENST00000597180 ANKRD18AQ8IVF6 992 aa22.83■■□□□ 1.25
IRF3-216ENST00000597180 ZNF784Q8NCA9 323 aaPredicted RBP22.83■■□□□ 1.25
IRF3-216ENST00000597180 KAZALD1Q96I82 304 aa22.83■■□□□ 1.25
IRF3-216ENST00000597180 SUCLG2Q96I99 432 aa22.83■■□□□ 1.25
IRF3-216ENST00000597180 A0A1B0GUL6 1792 aa22.82■■□□□ 1.24
IRF3-216ENST00000597180 ITGA6P23229 1130 aa22.82■■□□□ 1.24
IRF3-216ENST00000597180 RTFDC1Q9BY42 306 aaPredicted RBP22.82■■□□□ 1.24
IRF3-216ENST00000597180 ZNF277Q9NRM2 450 aaPredicted RBP22.82■■□□□ 1.24
IRF3-216ENST00000597180 MPNDQ8N594 471 aa22.81■■□□□ 1.24
IRF3-216ENST00000597180 TNNQ9UQP3 1299 aa22.81■■□□□ 1.24
IRF3-216ENST00000597180 IARSP41252 1262 aaKnown RBP22.8■■□□□ 1.24
IRF3-216ENST00000597180 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
IRF3-216ENST00000597180 DPP8Q6V1X1 898 aaPredicted RBP22.8■■□□□ 1.24
IRF3-216ENST00000597180 COL4A5P29400 1685 aa22.79■■□□□ 1.24
IRF3-216ENST00000597180 RABL6Q3YEC7 729 aaPredicted RBP22.79■■□□□ 1.24
IRF3-216ENST00000597180 SUPT20HQ8NEM7 779 aa22.79■■□□□ 1.24
IRF3-216ENST00000597180 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
IRF3-216ENST00000597180 VPS33BQ9H267 617 aa22.79■■□□□ 1.24
IRF3-216ENST00000597180 BSDC1Q9NW68 430 aaPredicted RBP22.79■■□□□ 1.24
IRF3-216ENST00000597180 RCAN3Q9UKA8 241 aa22.79■■□□□ 1.24
IRF3-216ENST00000597180 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
IRF3-216ENST00000597180 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
IRF3-216ENST00000597180 BICC1Q9H694 974 aaKnown RBP22.78■■□□□ 1.24
IRF3-216ENST00000597180 IGHMBP2P38935 993 aaKnown RBP22.77■■□□□ 1.24
IRF3-216ENST00000597180 GPSM2P81274 684 aa22.77■■□□□ 1.24
IRF3-216ENST00000597180 ANKRD44Q8N8A2 993 aa22.77■■□□□ 1.24
IRF3-216ENST00000597180 CLUAP1Q96AJ1 413 aa22.77■■□□□ 1.24
IRF3-216ENST00000597180 PODXL2Q9NZ53 605 aa22.77■■□□□ 1.24
IRF3-216ENST00000597180 NSFL1CQ9UNZ2 370 aaKnown RBP22.77■■□□□ 1.24
IRF3-216ENST00000597180 CHMP3Q9Y3E7 222 aa22.77■■□□□ 1.24
IRF3-216ENST00000597180 UBTFL1P0CB47 393 aaPredicted RBP22.76■■□□□ 1.23
IRF3-216ENST00000597180 CCDC57Q2TAC2 916 aa22.75■■□□□ 1.23
IRF3-216ENST00000597180 TMEM57Q8N5G2 664 aa22.75■■□□□ 1.23
IRF3-216ENST00000597180 MEIS3Q99687 375 aa22.75■■□□□ 1.23
IRF3-216ENST00000597180 DZIP1LQ8IYY4 767 aaKnown RBP22.74■■□□□ 1.23
IRF3-216ENST00000597180 MPHOSPH8Q99549 860 aa22.74■■□□□ 1.23
IRF3-216ENST00000597180 POLLQ9UGP5 575 aa22.74■■□□□ 1.23
IRF3-216ENST00000597180 MINPP1Q9UNW1 487 aa22.74■■□□□ 1.23
IRF3-216ENST00000597180 HDAC5Q9UQL6 1122 aa22.74■■□□□ 1.23
IRF3-216ENST00000597180 XDHP47989 1333 aa22.74■■□□□ 1.23
IRF3-216ENST00000597180 PPIP5K2O43314 1243 aa22.73■■□□□ 1.23
IRF3-216ENST00000597180 KIAA2012Q0VF49 1180 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms