RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 SDSP20132 328 aa28.17■■■□□ 2.1
SPTBN4-210ENST00000596900 CASC1Q6TDU7 716 aa28.17■■■□□ 2.1
SPTBN4-210ENST00000596900 FAM177BA6PVY3 158 aa28.17■■■□□ 2.1
SPTBN4-210ENST00000596900 EYA2O00167 538 aa28.17■■■□□ 2.1
SPTBN4-210ENST00000596900 APBA3O96018 575 aa28.16■■■□□ 2.1
SPTBN4-210ENST00000596900 DDX60Q8IY21 1712 aaKnown RBP28.16■■■□□ 2.1
SPTBN4-210ENST00000596900 PHF14O94880 888 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 BCL2L12Q9HB09 334 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 ANKRD18BA2A2Z9 1011 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 GLRX3O76003 335 aaKnown RBP28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 SEC24BO95487 1268 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 EAF2Q96CJ1 260 aaPredicted RBP28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 NYXQ9GZU5 481 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 ECHDC1Q9NTX5 307 aa28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 SRP68Q9UHB9 627 aaKnown RBP28.15■■■□□ 2.1
SPTBN4-210ENST00000596900 COL24A1Q17RW2 1714 aa28.14■■■□□ 2.1
SPTBN4-210ENST00000596900 SSFA2P28290 1259 aa28.14■■■□□ 2.1
SPTBN4-210ENST00000596900 TFCP2Q12800 502 aa28.14■■■□□ 2.1
SPTBN4-210ENST00000596900 TBC1D9Q6ZT07 1266 aa28.14■■■□□ 2.1
SPTBN4-210ENST00000596900 SETDB2Q96T68 719 aa28.14■■■□□ 2.1
SPTBN4-210ENST00000596900 RGPD3A6NKT7 1758 aaPredicted RBP28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 RGPD4Q7Z3J3 1758 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 ITGA6P23229 1130 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 TBC1D9BQ66K14 1250 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 SMIM5Q71RC9 77 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 PI4K2BQ8TCG2 481 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 CCDC85AQ96PX6 553 aaPredicted RBP28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 GREM2Q9H772 168 aa28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 TNS1Q9HBL0 1735 aaKnown RBP28.13■■■□□ 2.09
SPTBN4-210ENST00000596900 TNNI3KQ59H18 835 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 ATG9AQ7Z3C6 839 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 ZNF594Q96JF6 807 aaPredicted RBP28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 FPGT-TNNI3KV9GXZ4 949 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 TRIM6-TRIM34B2RNG4 842 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 AMIGO3Q86WK7 504 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 GPR108Q9NPR9 543 aa28.12■■■□□ 2.09
SPTBN4-210ENST00000596900 BICDL1Q6ZP65 573 aa28.11■■■□□ 2.09
SPTBN4-210ENST00000596900 AK9Q5TCS8 1911 aa28.11■■■□□ 2.09
SPTBN4-210ENST00000596900 HCLS1P14317 486 aaPredicted RBP28.1■■■□□ 2.09
SPTBN4-210ENST00000596900 GTF2E1P29083 439 aaPredicted RBP28.1■■■□□ 2.09
SPTBN4-210ENST00000596900 CCDC152Q4G0S7 254 aa28.1■■■□□ 2.09
SPTBN4-210ENST00000596900 MFAP1P55081 439 aaKnown RBP28.1■■■□□ 2.09
SPTBN4-210ENST00000596900 CCDC8Q9H0W5 538 aaPredicted RBP28.1■■■□□ 2.09
SPTBN4-210ENST00000596900 LRRC24Q50LG9 513 aa28.09■■■□□ 2.09
SPTBN4-210ENST00000596900 PROM2Q8N271 834 aa28.09■■■□□ 2.09
SPTBN4-210ENST00000596900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.09■■■□□ 2.09
SPTBN4-210ENST00000596900 RTL9Q8NET4 1388 aa28.08■■■□□ 2.09
SPTBN4-210ENST00000596900 RILPL2Q969X0 211 aa28.08■■■□□ 2.09
SPTBN4-210ENST00000596900 CEP126Q9P2H0 1117 aa28.08■■■□□ 2.09
SPTBN4-210ENST00000596900 LDHAL6AQ6ZMR3 332 aa28.08■■■□□ 2.09
SPTBN4-210ENST00000596900 CNTROBQ8N137 903 aa28.08■■■□□ 2.09
SPTBN4-210ENST00000596900 NBPF5PQ86XG9 351 aaPredicted RBP28.07■■■□□ 2.08
SPTBN4-210ENST00000596900 TPTE2Q6XPS3 522 aa28.06■■■□□ 2.08
SPTBN4-210ENST00000596900 AKAP2Q9Y2D5 859 aa28.06■■■□□ 2.08
SPTBN4-210ENST00000596900 ERFEQ4G0M1 354 aa28.06■■■□□ 2.08
SPTBN4-210ENST00000596900 PUS3Q9BZE2 481 aaKnown RBP28.06■■■□□ 2.08
SPTBN4-210ENST00000596900 LRP5O75197 1615 aa28.05■■■□□ 2.08
SPTBN4-210ENST00000596900 CARMIL3Q8ND23 1372 aa28.05■■■□□ 2.08
SPTBN4-210ENST00000596900 CNNM1Q9NRU3 951 aa28.05■■■□□ 2.08
SPTBN4-210ENST00000596900 TLR7Q9NYK1 1049 aaKnown RBP28.04■■■□□ 2.08
SPTBN4-210ENST00000596900 ZNF609O15014 1411 aa28.04■■■□□ 2.08
SPTBN4-210ENST00000596900 SLC10A5Q5PT55 438 aa28.04■■■□□ 2.08
SPTBN4-210ENST00000596900 TBC1D32Q96NH3 1257 aa28.04■■■□□ 2.08
SPTBN4-210ENST00000596900 DBNLQ9UJU6 430 aaKnown RBP28.04■■■□□ 2.08
SPTBN4-210ENST00000596900 CASZ1Q86V15 1759 aa28.02■■■□□ 2.08
SPTBN4-210ENST00000596900 NPHP1O15259 732 aa28.02■■■□□ 2.08
SPTBN4-210ENST00000596900 TFCP2L1Q9NZI6 479 aa28.02■■■□□ 2.08
SPTBN4-210ENST00000596900 RIPOR2Q9Y4F9 1068 aa28.02■■■□□ 2.08
SPTBN4-210ENST00000596900 SF3B3Q15393 1217 aaKnown RBP28.01■■■□□ 2.07
SPTBN4-210ENST00000596900 METTL24Q5JXM2 366 aa28.01■■■□□ 2.07
SPTBN4-210ENST00000596900 NEUROD6Q96NK8 337 aa28.01■■■□□ 2.07
SPTBN4-210ENST00000596900 C22orf23Q9BZE7 217 aa28.01■■■□□ 2.07
SPTBN4-210ENST00000596900 FLAD1Q8NFF5 587 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 DDRGK1Q96HY6 314 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 CDC5LQ99459 802 aaKnown RBP28■■■□□ 2.07
SPTBN4-210ENST00000596900 MPHOSPH8Q99549 860 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 A0A1B0GUL7 405 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 GYS1P13807 737 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 ATP5JP18859 108 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 IGHMBP2P38935 993 aaKnown RBP28■■■□□ 2.07
SPTBN4-210ENST00000596900 EVI5LQ96CN4 794 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 DBNDD2Q9BQY9 259 aa28■■■□□ 2.07
SPTBN4-210ENST00000596900 RIC1Q4ADV7 1423 aa27.99■■■□□ 2.07
SPTBN4-210ENST00000596900 MROH5Q6ZUA9 1318 aa27.99■■■□□ 2.07
SPTBN4-210ENST00000596900 ABCC12Q96J65 1359 aa27.99■■■□□ 2.07
SPTBN4-210ENST00000596900 NFIXQ14938 502 aa27.99■■■□□ 2.07
SPTBN4-210ENST00000596900 NLRP3Q96P20 1036 aa27.99■■■□□ 2.07
SPTBN4-210ENST00000596900 REC8O95072 547 aa27.98■■■□□ 2.07
SPTBN4-210ENST00000596900 MAP4K4O95819 1239 aaPredicted RBP27.98■■■□□ 2.07
SPTBN4-210ENST00000596900 AKT1S1Q96B36 256 aa27.98■■■□□ 2.07
SPTBN4-210ENST00000596900 CHMLP26374 656 aa27.97■■■□□ 2.07
SPTBN4-210ENST00000596900 TIMM10P62072 90 aa27.96■■■□□ 2.07
SPTBN4-210ENST00000596900 IPO9Q96P70 1041 aaKnown RBP27.96■■■□□ 2.07
SPTBN4-210ENST00000596900 BOLA2Q9H3K6 86 aa27.96■■■□□ 2.07
SPTBN4-210ENST00000596900 SEC31BQ9NQW1 1179 aa27.96■■■□□ 2.07
SPTBN4-210ENST00000596900 ZNF827Q17R98 1081 aa27.95■■■□□ 2.07
SPTBN4-210ENST00000596900 CNBD1Q8NA66 436 aa27.95■■■□□ 2.07
SPTBN4-210ENST00000596900 SPEF2Q9C093 1822 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms