RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 DZIP1LQ8IYY4 767 aaKnown RBP24.36■■□□□ 1.49
PNKP-207ENST00000596014 ARFGEF1Q9Y6D6 1849 aa24.36■■□□□ 1.49
PNKP-207ENST00000596014 FTSJ3Q8IY81 847 aaKnown RBP24.35■■□□□ 1.49
PNKP-207ENST00000596014 CRAMP1Q96RY5 1269 aa24.35■■□□□ 1.49
PNKP-207ENST00000596014 TAF1P21675 1872 aa24.35■■□□□ 1.49
PNKP-207ENST00000596014 DCAF8L1A6NGE4 600 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 PLIN1O60240 522 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 PRPF40BQ6NWY9 871 aaKnown RBP24.34■■□□□ 1.49
PNKP-207ENST00000596014 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
PNKP-207ENST00000596014 TMEM57Q8N5G2 664 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 RLBP1P12271 317 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 CTSWP56202 376 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 TTLL11Q8NHH1 800 aa24.34■■□□□ 1.49
PNKP-207ENST00000596014 CCDC152Q4G0S7 254 aa24.33■■□□□ 1.49
PNKP-207ENST00000596014 FOXO4P98177 505 aa24.32■■□□□ 1.48
PNKP-207ENST00000596014 CCDC85AQ96PX6 553 aaPredicted RBP24.32■■□□□ 1.48
PNKP-207ENST00000596014 CSF1RP07333 972 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 MS4A1P11836 297 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 EPHA10Q5JZY3 1008 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.31■■□□□ 1.48
PNKP-207ENST00000596014 PANK1Q8TE04 598 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 SUCLG2Q96I99 432 aa24.31■■□□□ 1.48
PNKP-207ENST00000596014 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
PNKP-207ENST00000596014 C7orf43Q8WVR3 580 aa24.3■■□□□ 1.48
PNKP-207ENST00000596014 MEIS3Q99687 375 aa24.3■■□□□ 1.48
PNKP-207ENST00000596014 SEC31BQ9NQW1 1179 aa24.3■■□□□ 1.48
PNKP-207ENST00000596014 ZNF219Q9P2Y4 722 aaPredicted RBP24.3■■□□□ 1.48
PNKP-207ENST00000596014 C21orf2O43822 256 aa24.29■■□□□ 1.48
PNKP-207ENST00000596014 GRAPQ13588 217 aa24.29■■□□□ 1.48
PNKP-207ENST00000596014 GRAPLQ8TC17 118 aaPredicted RBP24.29■■□□□ 1.48
PNKP-207ENST00000596014 GREM2Q9H772 168 aa24.29■■□□□ 1.48
PNKP-207ENST00000596014 BBOX1O75936 387 aa24.28■■□□□ 1.48
PNKP-207ENST00000596014 UBTFL1P0CB47 393 aaPredicted RBP24.28■■□□□ 1.48
PNKP-207ENST00000596014 CELF1Q92879 486 aaKnown RBP24.28■■□□□ 1.48
PNKP-207ENST00000596014 LMBR1LQ6UX01 489 aa24.27■■□□□ 1.48
PNKP-207ENST00000596014 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
PNKP-207ENST00000596014 RTL9Q8NET4 1388 aa24.27■■□□□ 1.48
PNKP-207ENST00000596014 COL4A1P02462 1669 aa24.26■■□□□ 1.47
PNKP-207ENST00000596014 PPEF1O14829 653 aaPredicted RBP24.26■■□□□ 1.47
PNKP-207ENST00000596014 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
PNKP-207ENST00000596014 PDE3AQ14432 1141 aa24.26■■□□□ 1.47
PNKP-207ENST00000596014 FAM161AQ3B820 660 aa24.26■■□□□ 1.47
PNKP-207ENST00000596014 BICC1Q9H694 974 aaKnown RBP24.26■■□□□ 1.47
PNKP-207ENST00000596014 GNAI3P08754 354 aa24.25■■□□□ 1.47
PNKP-207ENST00000596014 RABL6Q3YEC7 729 aaPredicted RBP24.24■■□□□ 1.47
PNKP-207ENST00000596014 OLFM4Q6UX06 510 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 ARHGAP27Q6ZUM4 889 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 HDAC5Q9UQL6 1122 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 CHMP3Q9Y3E7 222 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 ITGA6P23229 1130 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 C20orf194Q5TEA3 1177 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 SOGA3Q5TF21 947 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 ANKRD44Q8N8A2 993 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 ATP6V0A2Q9Y487 856 aa24.24■■□□□ 1.47
PNKP-207ENST00000596014 ZBTB7BO15156 539 aaPredicted RBP24.23■■□□□ 1.47
PNKP-207ENST00000596014 RRP1P56182 461 aaKnown RBP24.23■■□□□ 1.47
PNKP-207ENST00000596014 CDC5LQ99459 802 aaKnown RBP24.23■■□□□ 1.47
PNKP-207ENST00000596014 COG6Q9Y2V7 657 aa24.23■■□□□ 1.47
PNKP-207ENST00000596014 LRRFIP2Q9Y608 721 aaKnown RBP24.23■■□□□ 1.47
PNKP-207ENST00000596014 TMC4Q7Z404 712 aa24.22■■□□□ 1.47
PNKP-207ENST00000596014 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
PNKP-207ENST00000596014 SP8Q8IXZ3 490 aa24.22■■□□□ 1.47
PNKP-207ENST00000596014 FER1L6Q2WGJ9 1857 aa24.22■■□□□ 1.47
PNKP-207ENST00000596014 ANKRD18BA2A2Z9 1011 aa24.21■■□□□ 1.47
PNKP-207ENST00000596014 IFIT5Q13325 482 aaKnown RBP24.21■■□□□ 1.47
PNKP-207ENST00000596014 MVPQ14764 893 aaKnown RBP24.21■■□□□ 1.47
PNKP-207ENST00000596014 CCDC93Q567U6 631 aa24.21■■□□□ 1.47
PNKP-207ENST00000596014 CC2D2BQ6DHV5 1058 aa24.21■■□□□ 1.47
PNKP-207ENST00000596014 ANKRD18AQ8IVF6 992 aa24.21■■□□□ 1.47
PNKP-207ENST00000596014 CCDC57Q2TAC2 916 aa24.21■■□□□ 1.47
PNKP-207ENST00000596014 TMX4Q9H1E5 349 aaPredicted RBP24.21■■□□□ 1.47
PNKP-207ENST00000596014 SPEF2Q9C093 1822 aa24.19■■□□□ 1.46
PNKP-207ENST00000596014 GNAI2P04899 355 aa24.19■■□□□ 1.46
PNKP-207ENST00000596014 NFKBIEO00221 500 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 RTKN2Q8IZC4 609 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 DDX19BQ9UMR2 479 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 SNED1Q8TER0 1413 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 IGHMBP2P38935 993 aaKnown RBP24.18■■□□□ 1.46
PNKP-207ENST00000596014 GRIPAP1Q4V328 841 aa24.18■■□□□ 1.46
PNKP-207ENST00000596014 CHD4Q14839 1912 aa24.17■■□□□ 1.46
PNKP-207ENST00000596014 BSDC1Q9NW68 430 aaPredicted RBP24.17■■□□□ 1.46
PNKP-207ENST00000596014 SBF1O95248 1867 aa24.17■■□□□ 1.46
PNKP-207ENST00000596014 ZNF594Q96JF6 807 aaPredicted RBP24.16■■□□□ 1.46
PNKP-207ENST00000596014 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
PNKP-207ENST00000596014 CCDC88AQ3V6T2 1871 aa24.16■■□□□ 1.46
PNKP-207ENST00000596014 RASSF7Q02833 373 aa24.15■■□□□ 1.46
PNKP-207ENST00000596014 TAOK3Q9H2K8 898 aa24.15■■□□□ 1.46
PNKP-207ENST00000596014 SUPT16HQ9Y5B9 1047 aaKnown RBP24.15■■□□□ 1.46
PNKP-207ENST00000596014 TAF7LQ5H9L4 462 aa24.15■■□□□ 1.46
PNKP-207ENST00000596014 LTBP3Q9NS15 1303 aa24.14■■□□□ 1.46
PNKP-207ENST00000596014 FKBP4Q02790 459 aaKnown RBP eCLIP24.14■■□□□ 1.45
PNKP-207ENST00000596014 MPNDQ8N594 471 aa24.14■■□□□ 1.45
PNKP-207ENST00000596014 C1orf115Q9H7X2 142 aa24.14■■□□□ 1.45
PNKP-207ENST00000596014 NSFL1CQ9UNZ2 370 aaKnown RBP24.14■■□□□ 1.45
PNKP-207ENST00000596014 MTX1Q13505 466 aa24.13■■□□□ 1.45
PNKP-207ENST00000596014 PSMD1Q99460 953 aa24.13■■□□□ 1.45
PNKP-207ENST00000596014 MINPP1Q9UNW1 487 aa24.13■■□□□ 1.45
PNKP-207ENST00000596014 RFX5P48382 616 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms