RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX49-204ENST00000595858 EPHA10Q5JZY3 1008 aa18.8■□□□□ 0.6
DDX49-204ENST00000595858 STYK1Q6J9G0 422 aa18.8■□□□□ 0.6
DDX49-204ENST00000595858 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
DDX49-204ENST00000595858 CSF1RP07333 972 aa18.79■□□□□ 0.6
DDX49-204ENST00000595858 HOXA10P31260 410 aaPredicted RBP18.79■□□□□ 0.6
DDX49-204ENST00000595858 PIM2Q9P1W9 311 aa18.79■□□□□ 0.6
DDX49-204ENST00000595858 HDAC5Q9UQL6 1122 aa18.79■□□□□ 0.6
DDX49-204ENST00000595858 KIAA1551Q9HCM1 1747 aa18.79■□□□□ 0.6
DDX49-204ENST00000595858 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
DDX49-204ENST00000595858 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
DDX49-204ENST00000595858 CCDC85AQ96PX6 553 aaPredicted RBP18.78■□□□□ 0.6
DDX49-204ENST00000595858 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 BICC1Q9H694 974 aaKnown RBP18.77■□□□□ 0.6
DDX49-204ENST00000595858 DDX19BQ9UMR2 479 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 LAMB2P55268 1798 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
DDX49-204ENST00000595858 TTLL6Q8N841 843 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 CNKSR1Q969H4 720 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 CRAMP1Q96RY5 1269 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 WWC3Q9ULE0 1092 aa18.77■□□□□ 0.6
DDX49-204ENST00000595858 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
DDX49-204ENST00000595858 COL11A2P13942 1736 aaPredicted RBP18.76■□□□□ 0.59
DDX49-204ENST00000595858 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
DDX49-204ENST00000595858 GREM2Q9H772 168 aa18.76■□□□□ 0.59
DDX49-204ENST00000595858 RABL6Q3YEC7 729 aaPredicted RBP18.75■□□□□ 0.59
DDX49-204ENST00000595858 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
DDX49-204ENST00000595858 SEC31BQ9NQW1 1179 aa18.75■□□□□ 0.59
DDX49-204ENST00000595858 GNAI2P04899 355 aa18.75■□□□□ 0.59
DDX49-204ENST00000595858 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
DDX49-204ENST00000595858 MYH3P11055 1940 aa18.74■□□□□ 0.59
DDX49-204ENST00000595858 GRAPQ13588 217 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 FAM161AQ3B820 660 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 PRPF40BQ6NWY9 871 aaKnown RBP18.73■□□□□ 0.59
DDX49-204ENST00000595858 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
DDX49-204ENST00000595858 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
DDX49-204ENST00000595858 ZBTB40Q9NUA8 1239 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 RTL9Q8NET4 1388 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 DLEC1Q9Y238 1755 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 ITGA6P23229 1130 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 CELF1Q92879 486 aaKnown RBP18.73■□□□□ 0.59
DDX49-204ENST00000595858 BCS1LQ9Y276 419 aa18.73■□□□□ 0.59
DDX49-204ENST00000595858 BBOX1O75936 387 aa18.72■□□□□ 0.59
DDX49-204ENST00000595858 RPS8P62241 208 aaKnown RBP18.71■□□□□ 0.59
DDX49-204ENST00000595858 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
DDX49-204ENST00000595858 CRBNQ96SW2 442 aa18.71■□□□□ 0.59
DDX49-204ENST00000595858 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
DDX49-204ENST00000595858 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
DDX49-204ENST00000595858 BRCA1P38398 1863 aaKnown RBP18.71■□□□□ 0.59
DDX49-204ENST00000595858 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
DDX49-204ENST00000595858 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
DDX49-204ENST00000595858 ANKRD18AQ8IVF6 992 aa18.7■□□□□ 0.58
DDX49-204ENST00000595858 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
DDX49-204ENST00000595858 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
DDX49-204ENST00000595858 GOLGB1Q14789 3259 aaKnown RBP18.7■□□□□ 0.58
DDX49-204ENST00000595858 TAF1P21675 1872 aa18.69■□□□□ 0.58
DDX49-204ENST00000595858 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
DDX49-204ENST00000595858 PPEF1O14829 653 aaPredicted RBP18.69■□□□□ 0.58
DDX49-204ENST00000595858 C21orf2O43822 256 aa18.69■□□□□ 0.58
DDX49-204ENST00000595858 YBX3P16989 372 aaKnown RBP eCLIP18.69■□□□□ 0.582e-6■□□□□ 8.6
DDX49-204ENST00000595858 MTX1Q13505 466 aa18.69■□□□□ 0.58
DDX49-204ENST00000595858 GPR162Q16538 588 aa18.69■□□□□ 0.58
DDX49-204ENST00000595858 COL4A1P02462 1669 aa18.68■□□□□ 0.58
DDX49-204ENST00000595858 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
DDX49-204ENST00000595858 TMC4Q7Z404 712 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 ZNF594Q96JF6 807 aaPredicted RBP18.67■□□□□ 0.58
DDX49-204ENST00000595858 ATP6V0A2Q9Y487 856 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 SRGAP3O43295 1099 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
DDX49-204ENST00000595858 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 SP8Q8IXZ3 490 aa18.67■□□□□ 0.58
DDX49-204ENST00000595858 BSDC1Q9NW68 430 aaPredicted RBP18.67■□□□□ 0.58
DDX49-204ENST00000595858 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
DDX49-204ENST00000595858 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
DDX49-204ENST00000595858 SLC51AQ86UW1 340 aa18.66■□□□□ 0.58
DDX49-204ENST00000595858 MPHOSPH8Q99549 860 aa18.66■□□□□ 0.58
DDX49-204ENST00000595858 CACNA1SQ13698 1873 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
DDX49-204ENST00000595858 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
DDX49-204ENST00000595858 RPAP2Q8IXW5 612 aaPredicted RBP18.64■□□□□ 0.57
DDX49-204ENST00000595858 TMX4Q9H1E5 349 aaPredicted RBP18.64■□□□□ 0.57
DDX49-204ENST00000595858 CCDC93Q567U6 631 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 SSH3Q8TE77 659 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 ARFGEF1Q9Y6D6 1849 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 POLA2Q14181 598 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 PUS3Q9BZE2 481 aaKnown RBP18.63■□□□□ 0.57
DDX49-204ENST00000595858 MINPP1Q9UNW1 487 aa18.63■□□□□ 0.57
DDX49-204ENST00000595858 ARHGAP27Q6ZUM4 889 aa18.62■□□□□ 0.57
DDX49-204ENST00000595858 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
DDX49-204ENST00000595858 COPRSQ9NQ92 184 aa18.62■□□□□ 0.57
DDX49-204ENST00000595858 CNNM1Q9NRU3 951 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms