RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
ZNF550-207ENST00000595560 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
ZNF550-207ENST00000595560 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
ZNF550-207ENST00000595560 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
ZNF550-207ENST00000595560 TOMM70O94826 608 aa20.18■□□□□ 0.82
ZNF550-207ENST00000595560 SP8Q8IXZ3 490 aa20.18■□□□□ 0.82
ZNF550-207ENST00000595560 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
ZNF550-207ENST00000595560 COL4A1P02462 1669 aa20.18■□□□□ 0.82
ZNF550-207ENST00000595560 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
ZNF550-207ENST00000595560 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
ZNF550-207ENST00000595560 COL4A5P29400 1685 aa20.16■□□□□ 0.82
ZNF550-207ENST00000595560 PDE8AO60658 829 aa20.16■□□□□ 0.82
ZNF550-207ENST00000595560 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
ZNF550-207ENST00000595560 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
ZNF550-207ENST00000595560 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
ZNF550-207ENST00000595560 RTFDC1Q9BY42 306 aaPredicted RBP20.15■□□□□ 0.82
ZNF550-207ENST00000595560 DUOX1Q9NRD9 1551 aa20.15■□□□□ 0.82
ZNF550-207ENST00000595560 SCN4AP35499 1836 aa20.15■□□□□ 0.82
ZNF550-207ENST00000595560 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
ZNF550-207ENST00000595560 CCDC152Q4G0S7 254 aa20.14■□□□□ 0.81
ZNF550-207ENST00000595560 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
ZNF550-207ENST00000595560 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
ZNF550-207ENST00000595560 JDP2Q8WYK2 163 aa20.14■□□□□ 0.81
ZNF550-207ENST00000595560 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.81
ZNF550-207ENST00000595560 CELF1Q92879 486 aaKnown RBP20.14■□□□□ 0.81
ZNF550-207ENST00000595560 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
ZNF550-207ENST00000595560 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 FZD9O00144 591 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 GCKRQ14397 625 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 DPP8Q6V1X1 898 aaPredicted RBP20.13■□□□□ 0.81
ZNF550-207ENST00000595560 MIER1Q8N108 512 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 MPNDQ8N594 471 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
ZNF550-207ENST00000595560 POTECB2RU33 542 aa20.12■□□□□ 0.81
ZNF550-207ENST00000595560 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
ZNF550-207ENST00000595560 CTSWP56202 376 aa20.12■□□□□ 0.81
ZNF550-207ENST00000595560 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
ZNF550-207ENST00000595560 H7C1W4 665 aa20.11■□□□□ 0.81
ZNF550-207ENST00000595560 RPS8P62241 208 aaKnown RBP20.11■□□□□ 0.81
ZNF550-207ENST00000595560 UBE3BQ7Z3V4 1068 aa20.11■□□□□ 0.81
ZNF550-207ENST00000595560 TRMT2AQ8IZ69 625 aaKnown RBP20.11■□□□□ 0.81
ZNF550-207ENST00000595560 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
ZNF550-207ENST00000595560 L3MBTL3Q96JM7 780 aaPredicted RBP20.11■□□□□ 0.81
ZNF550-207ENST00000595560 F6X3S4 739 aa20.1■□□□□ 0.81
ZNF550-207ENST00000595560 PPIP5K2O43314 1243 aa20.1■□□□□ 0.81
ZNF550-207ENST00000595560 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
ZNF550-207ENST00000595560 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
ZNF550-207ENST00000595560 RTL9Q8NET4 1388 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 HSPA6P17066 643 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 FSTL1Q12841 308 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 AOC3Q16853 763 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 BEND3Q5T5X7 828 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 PLA2G12BQ9BX93 195 aa20.09■□□□□ 0.81
ZNF550-207ENST00000595560 CASP7P55210 303 aa20.08■□□□□ 0.81
ZNF550-207ENST00000595560 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
ZNF550-207ENST00000595560 NIM1KQ8IY84 436 aa20.08■□□□□ 0.81
ZNF550-207ENST00000595560 GPC2Q8N158 579 aa20.08■□□□□ 0.81
ZNF550-207ENST00000595560 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
ZNF550-207ENST00000595560 CEP350Q5VT06 3117 aa20.08■□□□□ 0.8
ZNF550-207ENST00000595560 IQCA1LA6NCM1 817 aa20.07■□□□□ 0.8
ZNF550-207ENST00000595560 EIF6P56537 245 aaKnown RBP20.07■□□□□ 0.8
ZNF550-207ENST00000595560 MRPL50Q8N5N7 158 aaKnown RBP20.07■□□□□ 0.8
ZNF550-207ENST00000595560 SMC1BQ8NDV3 1235 aa20.07■□□□□ 0.8
ZNF550-207ENST00000595560 CCDC85AQ96PX6 553 aaPredicted RBP20.07■□□□□ 0.8
ZNF550-207ENST00000595560 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
ZNF550-207ENST00000595560 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
ZNF550-207ENST00000595560 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
ZNF550-207ENST00000595560 GPSM2P81274 684 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 ALDH1L2Q3SY69 923 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 GREM2Q9H772 168 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 PODXL2Q9NZ53 605 aa20.05■□□□□ 0.8
ZNF550-207ENST00000595560 PTPRCP08575 1304 aa20.04■□□□□ 0.8
ZNF550-207ENST00000595560 ZNRF3Q9ULT6 936 aa20.04■□□□□ 0.8
ZNF550-207ENST00000595560 ALDH1L1O75891 902 aa20.03■□□□□ 0.8
ZNF550-207ENST00000595560 POLLQ9UGP5 575 aa20.03■□□□□ 0.8
ZNF550-207ENST00000595560 HACL1Q9UJ83 578 aa20.03■□□□□ 0.8
ZNF550-207ENST00000595560 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
ZNF550-207ENST00000595560 GRM8O00222 908 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 CSF1RP07333 972 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 WASHC4Q2M389 1173 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 SLC4A10Q6U841 1118 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 TBC1D16Q8TBP0 767 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 SRCIN1Q9C0H9 1055 aa20.02■□□□□ 0.8
ZNF550-207ENST00000595560 TAF1DQ9H5J8 278 aaPredicted RBP20.02■□□□□ 0.8
ZNF550-207ENST00000595560 C6orf229H3BNL8 230 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 EYA3Q99504 573 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 BCL2L13Q9BXK5 485 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 BSDC1Q9NW68 430 aaPredicted RBP20.01■□□□□ 0.79
ZNF550-207ENST00000595560 ANKIB1Q9P2G1 1089 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 GJA3Q9Y6H8 435 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 XDHP47989 1333 aa20.01■□□□□ 0.79
ZNF550-207ENST00000595560 ITGA6P23229 1130 aa20■□□□□ 0.79
ZNF550-207ENST00000595560 APLP1P51693 650 aa20■□□□□ 0.79
ZNF550-207ENST00000595560 CXCL9Q07325 125 aa20■□□□□ 0.79
ZNF550-207ENST00000595560 FAM161AQ3B820 660 aa20■□□□□ 0.79
ZNF550-207ENST00000595560 SMC4Q9NTJ3 1288 aa20■□□□□ 0.79
ZNF550-207ENST00000595560 UFL1O94874 794 aa19.99■□□□□ 0.79
ZNF550-207ENST00000595560 EPHX2P34913 555 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms