RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RAD17O75943 681 aa16.88■□□□□ 0.29
SCAF1-202ENST00000595242 C2orf69Q8N8R5 385 aa16.88■□□□□ 0.29
SCAF1-202ENST00000595242 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
SCAF1-202ENST00000595242 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-202ENST00000595242 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
SCAF1-202ENST00000595242 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
SCAF1-202ENST00000595242 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
SCAF1-202ENST00000595242 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
SCAF1-202ENST00000595242 RTFDC1Q9BY42 306 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-202ENST00000595242 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
SCAF1-202ENST00000595242 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-202ENST00000595242 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
SCAF1-202ENST00000595242 GPTP24298 496 aa16.86■□□□□ 0.29
SCAF1-202ENST00000595242 SUSD4Q5VX71 490 aa16.86■□□□□ 0.29
SCAF1-202ENST00000595242 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
SCAF1-202ENST00000595242 UBN2Q6ZU65 1347 aa16.86■□□□□ 0.29
SCAF1-202ENST00000595242 IBTKQ9P2D0 1353 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-202ENST00000595242 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
SCAF1-202ENST00000595242 PKN2Q16513 984 aaKnown RBP16.85■□□□□ 0.29
SCAF1-202ENST00000595242 KRT26Q7Z3Y9 468 aa16.85■□□□□ 0.29
SCAF1-202ENST00000595242 MAP3K15Q6ZN16 1313 aa16.85■□□□□ 0.29
SCAF1-202ENST00000595242 SLC10A3P09131 477 aa16.84■□□□□ 0.29
SCAF1-202ENST00000595242 HABP4Q5JVS0 413 aaKnown RBP16.84■□□□□ 0.29
SCAF1-202ENST00000595242 DPP8Q6V1X1 898 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-202ENST00000595242 SAMD7Q7Z3H4 446 aa16.84■□□□□ 0.29
SCAF1-202ENST00000595242 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
SCAF1-202ENST00000595242 MCM10Q7L590 875 aa16.83■□□□□ 0.28
SCAF1-202ENST00000595242 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
SCAF1-202ENST00000595242 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-202ENST00000595242 ABCC4O15439 1325 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 ADM5C9JUS6 153 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 NTSR2O95665 410 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 SP8Q8IXZ3 490 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-202ENST00000595242 MPNDQ8N594 471 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
SCAF1-202ENST00000595242 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
SCAF1-202ENST00000595242 HDAC9Q9UKV0 1011 aa16.82■□□□□ 0.28
SCAF1-202ENST00000595242 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 EGFRP00533 1210 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCAF1-202ENST00000595242 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
SCAF1-202ENST00000595242 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
SCAF1-202ENST00000595242 ZNF34Q8IZ26 560 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 DPF2Q92785 391 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 CENPFP49454 3210 aa16.81■□□□□ 0.28
SCAF1-202ENST00000595242 BBOX1O75936 387 aa16.8■□□□□ 0.28
SCAF1-202ENST00000595242 PPP1R42Q7Z4L9 355 aa16.8■□□□□ 0.28
SCAF1-202ENST00000595242 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
SCAF1-202ENST00000595242 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
SCAF1-202ENST00000595242 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
SCAF1-202ENST00000595242 ZNF296Q8WUU4 475 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-202ENST00000595242 DLG5Q8TDM6 1919 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 PSMD14O00487 310 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 MYL6BP14649 208 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 RSPH6AQ9H0K4 717 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
SCAF1-202ENST00000595242 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.28
SCAF1-202ENST00000595242 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.28
SCAF1-202ENST00000595242 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
SCAF1-202ENST00000595242 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
SCAF1-202ENST00000595242 TBC1D8O95759 1140 aa16.77■□□□□ 0.28
SCAF1-202ENST00000595242 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
SCAF1-202ENST00000595242 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
SCAF1-202ENST00000595242 SCN9AQ15858 1988 aa16.77■□□□□ 0.27
SCAF1-202ENST00000595242 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
SCAF1-202ENST00000595242 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
SCAF1-202ENST00000595242 GIGYF2Q6Y7W6 1299 aaKnown RBP16.76■□□□□ 0.27
SCAF1-202ENST00000595242 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
SCAF1-202ENST00000595242 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
SCAF1-202ENST00000595242 CDCA5Q96FF9 252 aa16.75■□□□□ 0.27
SCAF1-202ENST00000595242 UTP14AQ9BVJ6 771 aaKnown RBP16.75■□□□□ 0.27
SCAF1-202ENST00000595242 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
SCAF1-202ENST00000595242 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
SCAF1-202ENST00000595242 BRCA2P51587 3418 aa16.74■□□□□ 0.27
SCAF1-202ENST00000595242 HTTP42858 3142 aa16.74■□□□□ 0.27
SCAF1-202ENST00000595242 RPS12P25398 132 aaKnown RBP16.74■□□□□ 0.27
SCAF1-202ENST00000595242 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
SCAF1-202ENST00000595242 GGA3Q9NZ52 723 aa16.74■□□□□ 0.27
SCAF1-202ENST00000595242 FXR1P51114 621 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCAF1-202ENST00000595242 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
SCAF1-202ENST00000595242 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
SCAF1-202ENST00000595242 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
SCAF1-202ENST00000595242 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
SCAF1-202ENST00000595242 GPR25O00155 361 aa16.72■□□□□ 0.27
SCAF1-202ENST00000595242 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
SCAF1-202ENST00000595242 GRAPQ13588 217 aa16.72■□□□□ 0.27
SCAF1-202ENST00000595242 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-202ENST00000595242 KCNQ5Q9NR82 932 aa16.72■□□□□ 0.27
SCAF1-202ENST00000595242 SZT2Q5T011 3432 aa16.72■□□□□ 0.27
SCAF1-202ENST00000595242 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-202ENST00000595242 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
SCAF1-202ENST00000595242 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms